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We are analyzing https://www.nature.com/articles/s41467-021-21860-7.

Title:
A noncanonical AR addiction drives enzalutamide resistance in prostate cancer | Nature Communications
Description:
Resistance to next-generation anti-androgen enzalutamide (ENZ) constitutes a major challenge for the treatment of castration-resistant prostate cancer (CRPC). By performing genome-wide ChIP-seq profiling in ENZ-resistant CRPC cells we identify a set of androgen receptor (AR) binding sites with increased AR binding intensity (ARBS-gained). While ARBS-gained loci lack the canonical androgen response elements (ARE) and pioneer factor FOXA1 binding motifs, they are highly enriched with CpG islands and the binding sites of unmethylated CpG dinucleotide-binding protein CXXC5 and the partner TET2. RNA-seq analysis reveals that both CXXC5 and its regulated genes including ID1 are upregulated in ENZ-resistant cell lines and these results are further confirmed in patient-derived xenografts (PDXs) and patient specimens. Consistent with the finding that ARBS-gained loci are highly enriched with H3K27ac modification, ENZ-resistant PCa cells, organoids, xenografts and PDXs are hyper-sensitive to NEO2734, a dual inhibitor of BET and CBP/p300 proteins. These results not only reveal a noncanonical AR function in acquisition of ENZ resistance, but also posit a treatment strategy to target this vulnerability in ENZ-resistant CRPC. Resistance to second generation anti-androgen therapies such as enzalutamide (ENZ) can emerge in prostate cancer patients. Here, the authors identify an ENZ-resistant mechanism driven by AR-dependent transcription of noncanonical targets that make resistant cells susceptible to dual inhibition of BET and CBP/p300 signaling.
Website Age:
30 years and 10 months (reg. 1994-08-11).

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  • Science
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How Much Does Nature.com Make? {๐Ÿ’ฐ}


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Keywords {๐Ÿ”}

cells, pubmed, fig, cxxc, article, crpc, enzr, expression, data, cell, google, scholar, cancer, cenzr, tet, cas, supplementary, central, loci, genes, analysis, noncanonical, prostate, enz, neo, binding, target, arbsgained, growth, gene, control, protein, resistance, pfn, nature, inhibitors, signaling, ccon, treatment, androgen, pca, proteins, dilution, compared, statistical, chipseq, enzresistant, receptor, inhibitor, rnaseq,

Topics {โœ’๏ธ}

nature portfolio privacy policy advertising bet-cbp/p300 dual inhibitor tumor volumeโ€‰=โ€‰lengthโ€‰ร—โ€‰widthโ€‰ร—โ€‰widthโ€‰ร—โ€‰0 bet-cbp/p300 dual inhibitors social media constitutively open chromatin androgen-dependent ar-occupied regions enhancer-driven lineage-specific transcription wild-type prostate cancer reprints research design androgen-independent ar-occupied regions de novo-motif discovery cbp/p300 inhibitor cpi63742 androgen-refractory prostate cancer japan chip-seq libraries castration-resistant prostate cancer histone acetyltransferases p300/cbp nature 474 nature 489 nature 497 nature 401 nature 510 nature fast gapped-read alignment genome-wide rna-seq arbs-gained-cpgi gene loci cell lineage development androgen-dependent occupied regions su2c/pcf dream team linked-read genome sequencing arbs-gained cpgi-positive sites reporting summary express full-length ar rna-seq analysis revealed open platform noncanonical ar-dependent function transcriptional profiling identifies selective swi/snf dependencies ar-negative/low crpc variants androgen receptor activity-low androgen receptor-suppressed driver ar-dependent mechanism responsible generation anti-androgen enzalutamide long-range interaction landscape precipitated protein-dna complexes noncanonical ar-targeted genes

Schema {๐Ÿ—บ๏ธ}

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      headline:A noncanonical AR addiction drives enzalutamide resistance in prostate cancer
      description:Resistance to next-generation anti-androgen enzalutamide (ENZ) constitutes a major challenge for the treatment of castration-resistant prostate cancer (CRPC). By performing genome-wide ChIP-seq profiling in ENZ-resistant CRPC cells we identify a set of androgen receptor (AR) binding sites with increased AR binding intensity (ARBS-gained). While ARBS-gained loci lack the canonical androgen response elements (ARE) and pioneer factor FOXA1 binding motifs, they are highly enriched with CpG islands and the binding sites of unmethylated CpG dinucleotide-binding protein CXXC5 and the partner TET2. RNA-seq analysis reveals that both CXXC5 and its regulated genes including ID1 are upregulated in ENZ-resistant cell lines and these results are further confirmed in patient-derived xenografts (PDXs) and patient specimens. Consistent with the finding that ARBS-gained loci are highly enriched with H3K27ac modification, ENZ-resistant PCa cells, organoids, xenografts and PDXs are hyper-sensitive to NEO2734, a dual inhibitor of BET and CBP/p300 proteins. These results not only reveal a noncanonical AR function in acquisition of ENZ resistance, but also posit a treatment strategy to target this vulnerability in ENZ-resistant CRPC. Resistance to second generation anti-androgen therapies such as enzalutamide (ENZ) can emerge in prostate cancer patients. Here, the authors identify an ENZ-resistant mechanism driven by AR-dependent transcription of noncanonical targets that make resistant cells susceptible to dual inhibition of BET and CBP/p300 signaling.
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         type:PostalAddress
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         name:Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine and Science, Rochester, USA
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         name:Department of Experimental Therapeutics, BC Cancer Research Centre, Vancouver, Canada
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         name:Department of Laboratory Medicine and Pathology, Mayo Clinic College of Medicine and Science, Rochester, USA
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         name:Division of Biomedical Statistics and Informatics, Mayo Clinic College of Medicine and Science, Rochester, USA
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         name:Department of Molecular Pharmacology and Experimental Therapeutics, Mayo Clinic College of Medicine and Science, Rochester, USA
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         name:The Vancouver Prostate Centre, Department of Urologic Sciences, University of British Columbia, Vancouver, Canada
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         name:Department of Experimental Therapeutics, BC Cancer Research Centre, Vancouver, Canada
         type:PostalAddress
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         type:PostalAddress
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         name:Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine and Science, Rochester, USA
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         name:Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine and Science, Rochester, USA
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         name:Department of Urology, Mayo Clinic College of Medicine and Science, Rochester, USA
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            address:
               name:Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine and Science, Rochester, USA
               type:PostalAddress
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               name:Division of Biomedical Statistics and Informatics, Mayo Clinic College of Medicine and Science, Rochester, USA
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            name:Division of Biomedical Statistics and Informatics, Mayo Clinic College of Medicine and Science
            address:
               name:Division of Biomedical Statistics and Informatics, Mayo Clinic College of Medicine and Science, Rochester, USA
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               name:Division of Medical Oncology, Department of Internal Medicine, Mayo Clinic College of Medicine and Science, Rochester, USA
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            address:
               name:Department of Experimental Therapeutics, BC Cancer Research Centre, Vancouver, Canada
               type:PostalAddress
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            name:Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine and Science
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               name:Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine and Science, Rochester, USA
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               name:Department of Experimental Therapeutics, BC Cancer Research Centre, Vancouver, Canada
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            address:
               name:Department of Urology, Mayo Clinic College of Medicine and Science, Rochester, USA
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      name:Rafael Jimenez
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               name:Department of Laboratory Medicine and Pathology, Mayo Clinic College of Medicine and Science, Rochester, USA
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            address:
               name:Division of Biomedical Statistics and Informatics, Mayo Clinic College of Medicine and Science, Rochester, USA
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            address:
               name:Department of Molecular Pharmacology and Experimental Therapeutics, Mayo Clinic College of Medicine and Science, Rochester, USA
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            name:University of British Columbia
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            address:
               name:Department of Experimental Therapeutics, BC Cancer Research Centre, Vancouver, Canada
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            name:Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine and Science
            address:
               name:Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine and Science, Rochester, USA
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      name:Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine and Science, Rochester, USA
      name:Division of Biomedical Statistics and Informatics, Mayo Clinic College of Medicine and Science, Rochester, USA
      name:Division of Biomedical Statistics and Informatics, Mayo Clinic College of Medicine and Science, Rochester, USA
      name:Division of Medical Oncology, Department of Internal Medicine, Mayo Clinic College of Medicine and Science, Rochester, USA
      name:Department of Experimental Therapeutics, BC Cancer Research Centre, Vancouver, Canada
      name:Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine and Science, Rochester, USA
      name:Department of Experimental Therapeutics, BC Cancer Research Centre, Vancouver, Canada
      name:Department of Urology, Mayo Clinic College of Medicine and Science, Rochester, USA
      name:Department of Laboratory Medicine and Pathology, Mayo Clinic College of Medicine and Science, Rochester, USA
      name:Division of Biomedical Statistics and Informatics, Mayo Clinic College of Medicine and Science, Rochester, USA
      name:Department of Molecular Pharmacology and Experimental Therapeutics, Mayo Clinic College of Medicine and Science, Rochester, USA
      name:The Vancouver Prostate Centre, Department of Urologic Sciences, University of British Columbia, Vancouver, Canada
      name:Department of Experimental Therapeutics, BC Cancer Research Centre, Vancouver, Canada
      name:The Vancouver Prostate Centre, Department of Urologic Sciences, University of British Columbia, Vancouver, Canada
      name:Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine and Science, Rochester, USA
      name:Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine and Science, Rochester, USA
      name:Department of Urology, Mayo Clinic College of Medicine and Science, Rochester, USA
      name:Mayo Clinic Cancer Center, Mayo Clinic College of Medicine and Science, Rochester, USA

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