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Keywords {🔍}

fig, additional, file, subgroups, article, liver, hcc, proteins, data, microenvironment, patients, proteomic, analysis, metabolic, samples, china, heterogeneity, cell, noncancerous, tumor, metastasis, test, google, scholar, information, tissues, hepatocellular, mrnaprotein, pathways, panel, protein, carcinoma, study, metabolism, survival, correlations, genes, contributed, authors, potential, identified, based, expression, differentially, west, cookies, bmc, proteogenomic, relapse, showed,

Topics {✒️}

hbv-related hepatocellular carcinoma figures s1–s6 springer nature stressed hcc-initiating cells unique metastasis-inclined phenotype integrated proteogenomic analysis aberrant post-transcriptional regulation highest mrna-protein correlations unique metastasis-inclined microenvironment integrated proteogenomic characterization important recurrence-related factors positive mrna-protein correlations privacy choices/manage cookies discordant mrna-protein expressions additional information publisher' hepatocellular carcinoma based authors scientific editing bmc state privacy rights recurrence-free survival based induces hepatocellular carcinogenesis state key laboratory sharing differentially expressed proteins national key technologies abbreviations hcc significant positive correlations professor jiajie peng adjacent liver microenvironment hepatocellular carcinoma significant discordant expression metabolism-related pathways creative commons licence post-transcriptional modifications metabolism-related proteins 31 metabolism-related proteins liver immune microenvironment post-transcriptional regulation mrna-protein pairs mrna-protein correlations 834 mrna-protein pairs west china biobanks west china hospital decreased gene expression collaborative innovation center hepatic microenvironment contributing european economic area undergo surgical resection joint random forest multivariable analysis authenticated

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         description:Understanding the adjacent liver microenvironment of hepatocellular carcinoma (HCC) with possible metastasis tendency might provide a strategy for risk classification of patients and potential therapies by converting the unique metastasis-inclined microenvironment to a metastasis-averse one. In this study, we performed an integrated proteogenomic analysis to have a comprehensive view on the heterogeneity of hepatic microenvironment contributing to HCC metastasis. Pairing mRNA-protein analysis revealed consistent and discordant mRNA-protein expressions in metabolism regulations and cancer-related pathways, respectively. Proteomic profiling identified three subgroups associated with the recurrence-free survival of patients. These proteomic subgroups demonstrated distinct features in metabolic reprogramming, which was potentially modified by epigenetic alterations. This study raises the point of metabolic heterogeneity in HCC noncancerous tissues and may offer a new perspective on HCC treatment.
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      headline:Integrated proteogenomic analysis revealed the metabolic heterogeneity in noncancerous liver tissues of patients with hepatocellular carcinoma
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      name:Department of Liver Surgery and Liver Transplantation, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, Sichuan University and Collaborative Innovation Center of Biotherapy, Chengdu, China
      name:Department of Liver Surgery and Liver Transplantation, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, Sichuan University and Collaborative Innovation Center of Biotherapy, Chengdu, China
      name:School of Computer Science, Northwestern Polytechnical University, Xi’an, China
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      name:Laboratory of Pathology, Department of Pathology, West China Hospital, Sichuan University, Chengdu, China
      name:Department of Liver Surgery and Liver Transplantation, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, Sichuan University and Collaborative Innovation Center of Biotherapy, Chengdu, China
      name:Department of Liver Surgery and Liver Transplantation, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, Sichuan University and Collaborative Innovation Center of Biotherapy, Chengdu, China

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