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Title:
RNA editing derived epitopes function as cancer antigens to elicit immune responses | Nature Communications
Description:
In addition to genomic mutations, RNA editing is another major mechanism creating sequence variations in proteins by introducing nucleotide changes in mRNA sequences. Deregulated RNA editing contributes to different types of human diseases, including cancers. Here we report that peptides generated as a consequence of RNA editing are indeed naturally presented by human leukocyte antigen (HLA) molecules. We provide evidence that effector CD8+ T cells specific for edited peptides derived from cyclin I are present in human tumours and attack tumour cells that are presenting these epitopes. We show that subpopulations of cancer patients have increased peptide levels and that levels of edited RNA correlate with peptide copy numbers. These findings demonstrate that RNA editing extends the classes of HLA presented self-antigens and that these antigens can be recognised by the immune system. RNA editing is a biological process that creates sequence variation. Here the authors show that peptides generated as a consequence of RNA editing are naturally presented by human leukocyte antigen (HLA) and serve as antigens to elicit anti-tumour immune responses.
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headline:RNA editing derived epitopes function as cancer antigens to elicit immune responses
description:In addition to genomic mutations, RNA editing is another major mechanism creating sequence variations in proteins by introducing nucleotide changes in mRNA sequences. Deregulated RNA editing contributes to different types of human diseases, including cancers. Here we report that peptides generated as a consequence of RNA editing are indeed naturally presented by human leukocyte antigen (HLA) molecules. We provide evidence that effector CD8+ T cells specific for edited peptides derived from cyclin I are present in human tumours and attack tumour cells that are presenting these epitopes. We show that subpopulations of cancer patients have increased peptide levels and that levels of edited RNA correlate with peptide copy numbers. These findings demonstrate that RNA editing extends the classes of HLA presented self-antigens and that these antigens can be recognised by the immune system. RNA editing is a biological process that creates sequence variation. Here the authors show that peptides generated as a consequence of RNA editing are naturally presented by human leukocyte antigen (HLA) and serve as antigens to elicit anti-tumour immune responses.
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headline:RNA editing derived epitopes function as cancer antigens to elicit immune responses
description:In addition to genomic mutations, RNA editing is another major mechanism creating sequence variations in proteins by introducing nucleotide changes in mRNA sequences. Deregulated RNA editing contributes to different types of human diseases, including cancers. Here we report that peptides generated as a consequence of RNA editing are indeed naturally presented by human leukocyte antigen (HLA) molecules. We provide evidence that effector CD8+ T cells specific for edited peptides derived from cyclin I are present in human tumours and attack tumour cells that are presenting these epitopes. We show that subpopulations of cancer patients have increased peptide levels and that levels of edited RNA correlate with peptide copy numbers. These findings demonstrate that RNA editing extends the classes of HLA presented self-antigens and that these antigens can be recognised by the immune system. RNA editing is a biological process that creates sequence variation. Here the authors show that peptides generated as a consequence of RNA editing are naturally presented by human leukocyte antigen (HLA) and serve as antigens to elicit anti-tumour immune responses.
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name:Immatics Biotechnologies
address:
name:Immatics Biotechnologies, Tübingen, Germany
type:PostalAddress
type:Organization
name:Jason Roszik
url:http://orcid.org/0000-0002-4561-6170
affiliation:
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
name:Leila J. Williams
url:http://orcid.org/0000-0002-9833-859X
affiliation:
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
name:Xinxin Peng
affiliation:
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Bioinformatics and Computation Biology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
name:Yulun Chiu
affiliation:
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Bioinformatics and Computation Biology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
name:Chih-Chiang Tsou
affiliation:
name:Immatics US
address:
name:Immatics US, Houston, USA
type:PostalAddress
type:Organization
name:Franziska Hoffgaard
affiliation:
name:Immatics Biotechnologies
address:
name:Immatics Biotechnologies, Tübingen, Germany
type:PostalAddress
type:Organization
name:Valentina Goldfinger
affiliation:
name:Immatics Biotechnologies
address:
name:Immatics Biotechnologies, Tübingen, Germany
type:PostalAddress
type:Organization
name:Oliver Schoor
affiliation:
name:Immatics Biotechnologies
address:
name:Immatics Biotechnologies, Tübingen, Germany
type:PostalAddress
type:Organization
name:Amjad Talukder
affiliation:
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
name:Marie A. Forget
affiliation:
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
name:Cara Haymaker
affiliation:
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
name:Chantale Bernatchez
affiliation:
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
name:Leng Han
url:http://orcid.org/0000-0002-7380-2640
affiliation:
name:The University of Texas Health Science Center at Houston McGovern Medical School
address:
name:Department of Biochemistry and Molecular Biology, The University of Texas Health Science Center at Houston McGovern Medical School, Houston, USA
type:PostalAddress
type:Organization
name:Yiu-Huen Tsang
affiliation:
name:Baylor College of Medicine
address:
name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
type:PostalAddress
type:Organization
name:Kathleen Kong
affiliation:
name:Baylor College of Medicine
address:
name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
type:PostalAddress
type:Organization
name:Xiaoyan Xu
affiliation:
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Bioinformatics and Computation Biology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
name:China Medical University
address:
name:Department of Pathophysiology, College of Basic Medicine, China Medical University, Shenyang Shi, 110122, China
type:PostalAddress
type:Organization
name:Kenneth L. Scott
affiliation:
name:Baylor College of Medicine
address:
name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
type:PostalAddress
type:Organization
name:Harpreet Singh-Jasuja
affiliation:
name:Immatics Biotechnologies
address:
name:Immatics Biotechnologies, Tübingen, Germany
type:PostalAddress
type:Organization
name:Immatics US
address:
name:Immatics US, Houston, USA
type:PostalAddress
type:Organization
name:Greg Lizee
affiliation:
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
name:Han Liang
url:http://orcid.org/0000-0001-7633-286X
affiliation:
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Bioinformatics and Computation Biology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Systems Biology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
name:Toni Weinschenk
url:http://orcid.org/0000-0001-8644-0290
affiliation:
name:Immatics Biotechnologies
address:
name:Immatics Biotechnologies, Tübingen, Germany
type:PostalAddress
type:Organization
name:Immatics US
address:
name:Immatics US, Houston, USA
type:PostalAddress
type:Organization
email:[email protected]
name:Gordon B. Mills
affiliation:
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Systems Biology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
email:[email protected]
name:Patrick Hwu
affiliation:
name:The University of Texas MD Anderson Cancer Center
address:
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
type:PostalAddress
type:Organization
email:[email protected]
PostalAddress:
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Immatics Biotechnologies, Tübingen, Germany
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Department of Bioinformatics and Computation Biology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Department of Bioinformatics and Computation Biology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Immatics US, Houston, USA
name:Immatics Biotechnologies, Tübingen, Germany
name:Immatics Biotechnologies, Tübingen, Germany
name:Immatics Biotechnologies, Tübingen, Germany
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Department of Biochemistry and Molecular Biology, The University of Texas Health Science Center at Houston McGovern Medical School, Houston, USA
name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
name:Department of Bioinformatics and Computation Biology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Department of Pathophysiology, College of Basic Medicine, China Medical University, Shenyang Shi, 110122, China
name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
name:Immatics Biotechnologies, Tübingen, Germany
name:Immatics US, Houston, USA
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Department of Bioinformatics and Computation Biology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Department of Systems Biology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Immatics Biotechnologies, Tübingen, Germany
name:Immatics US, Houston, USA
name:Department of Systems Biology, The University of Texas MD Anderson Cancer Center, Houston, USA
name:Department of Melanoma Medical Oncology, The University of Texas MD Anderson Cancer Center, Houston, USA
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