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         headline:Transcriptional specialization of human dendritic cell subsets in response to microbial vaccines
         description:The mechanisms by which microbial vaccines interact with human APCs remain elusive. Herein, we describe the transcriptional programs induced in human DCs by pathogens, innate receptor ligands and vaccines. Exposure of DCs to influenza, Salmonella enterica and Staphylococcus aureus allows us to build a modular framework containing 204 transcript clusters. We use this framework to characterize the responses of human monocytes, monocyte-derived DCs and blood DC subsets to 13 vaccines. Different vaccines induce distinct transcriptional programs based on pathogen type, adjuvant formulation and APC targeted. Fluzone, Pneumovax and Gardasil, respectively, activate monocyte-derived DCs, monocytes and CD1c+ blood DCs, highlighting APC specialization in response to vaccines. Finally, the blood signatures from individuals vaccinated with Fluzone or infected with influenza reveal a signature of adaptive immunity activation following vaccination and symptomatic infections, but not asymptomatic infections. These data, offered with a web interface, may guide the development of improved vaccines. The effects of vaccines on human dendritic cells (DCs) are incompletely understood. Here the authors build a transcriptional modular network based on in vitroinfection of human DCs and apply it for the characterization of the DC response to 13 different vaccines.
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      headline:Transcriptional specialization of human dendritic cell subsets in response to microbial vaccines
      description:The mechanisms by which microbial vaccines interact with human APCs remain elusive. Herein, we describe the transcriptional programs induced in human DCs by pathogens, innate receptor ligands and vaccines. Exposure of DCs to influenza, Salmonella enterica and Staphylococcus aureus allows us to build a modular framework containing 204 transcript clusters. We use this framework to characterize the responses of human monocytes, monocyte-derived DCs and blood DC subsets to 13 vaccines. Different vaccines induce distinct transcriptional programs based on pathogen type, adjuvant formulation and APC targeted. Fluzone, Pneumovax and Gardasil, respectively, activate monocyte-derived DCs, monocytes and CD1c+ blood DCs, highlighting APC specialization in response to vaccines. Finally, the blood signatures from individuals vaccinated with Fluzone or infected with influenza reveal a signature of adaptive immunity activation following vaccination and symptomatic infections, but not asymptomatic infections. These data, offered with a web interface, may guide the development of improved vaccines. The effects of vaccines on human dendritic cells (DCs) are incompletely understood. Here the authors build a transcriptional modular network based on in vitroinfection of human DCs and apply it for the characterization of the DC response to 13 different vaccines.
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      address:
         name:Sidra Medical and Research Center, Qatar
         type:PostalAddress
      name:Baylor Institute for Immunology Research
      address:
         name:Baylor Institute for Immunology Research, Dallas, USA
         type:PostalAddress
      name:Jackson Laboratory for Genomic Medicine
      address:
         name:Jackson Laboratory for Genomic Medicine, Farmington, USA
         type:PostalAddress
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      address:
         name:Baylor Institute for Immunology Research, Dallas, USA
         type:PostalAddress
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      address:
         name:Jackson Laboratory for Genomic Medicine, Farmington, USA
         type:PostalAddress
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      address:
         name:Baylor Institute for Immunology Research, Dallas, USA
         type:PostalAddress
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            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
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      name:Nicole Baldwin
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            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
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      name:Alma-Martina Cepika
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            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
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            type:Organization
      name:Shruti Athale
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Yaming Xue
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Chun I Yu
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
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      name:Patrick Metang
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
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      name:Abhilasha Cheruku
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            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
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      name:Isabelle Berthier
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
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      name:Ingrid Gayet
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
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      name:Yuanyuan Wang
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
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      name:Marina Ohouo
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:LuAnn Snipes
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Hui Xu
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Gerlinde Obermoser
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
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      name:Derek Blankenship
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
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      name:Sangkon Oh
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
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      name:Octavio Ramilo
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            name:Nationwide Children’s Hospital
            address:
               name:Nationwide Children’s Hospital, Columbus, USA
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      name:Damien Chaussabel
      affiliation:
            name:Benaroya Research Institute
            address:
               name:Benaroya Research Institute, Seattle, USA
               type:PostalAddress
            type:Organization
            name:Sidra Medical and Research Center
            address:
               name:Sidra Medical and Research Center, Qatar
               type:PostalAddress
            type:Organization
      name:Jacques Banchereau
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
            name:Jackson Laboratory for Genomic Medicine
            address:
               name:Jackson Laboratory for Genomic Medicine, Farmington, USA
               type:PostalAddress
            type:Organization
      name:Karolina Palucka
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
            name:Jackson Laboratory for Genomic Medicine
            address:
               name:Jackson Laboratory for Genomic Medicine, Farmington, USA
               type:PostalAddress
            type:Organization
      name:Virginia Pascual
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      email:[email protected]
PostalAddress:
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Nationwide Children’s Hospital, Columbus, USA
      name:Benaroya Research Institute, Seattle, USA
      name:Sidra Medical and Research Center, Qatar
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Jackson Laboratory for Genomic Medicine, Farmington, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Jackson Laboratory for Genomic Medicine, Farmington, USA
      name:Baylor Institute for Immunology Research, Dallas, USA

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