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nature portfolio privacy policy granulocyte-macrophage colony-stimulating factor granulocyte/macrophage colony-stimulating factor advertising alexa fluor 700-cd3/cd19/cd20 baylor research institute open questions alexa fluor 700-hla-dr facilitate public access nature 392 nature 466 nature 490 nature 474 nature 0/ reprints research support hla-dr-apc-eflour780 multi-parametric profiles necessitates nucleotide-binding oligomerization domain immunology research research center tumour-necrosis factor α stimulation markers hla-dr computational tools type-ii ifn-related modules single-stranded rna ifn-alpha-producing cd11c social media monocyte-derived dcs remain il-1beta/il-18 processing inflammasome cd4+ t-cell responses directing t-cell responses dendritic cell lineage monocyte-derived inflammatory dcs efficiently cross-present necrotic highlighting cross-platform usability h3n2/wisconsin infection analyses c-type lectin receptors tools systems biology-based characterization activate monocyte-derived dcs highlighting apc-specific responses permissions nf-κb-inducible transcripts /ii ifn-related modules media author correspondence dissect pathogen-induced signatures define pathogen-induced molecular

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         headline:Transcriptional specialization of human dendritic cell subsets in response to microbial vaccines
         description:The mechanisms by which microbial vaccines interact with human APCs remain elusive. Herein, we describe the transcriptional programs induced in human DCs by pathogens, innate receptor ligands and vaccines. Exposure of DCs to influenza, Salmonella enterica and Staphylococcus aureus allows us to build a modular framework containing 204 transcript clusters. We use this framework to characterize the responses of human monocytes, monocyte-derived DCs and blood DC subsets to 13 vaccines. Different vaccines induce distinct transcriptional programs based on pathogen type, adjuvant formulation and APC targeted. Fluzone, Pneumovax and Gardasil, respectively, activate monocyte-derived DCs, monocytes and CD1c+ blood DCs, highlighting APC specialization in response to vaccines. Finally, the blood signatures from individuals vaccinated with Fluzone or infected with influenza reveal a signature of adaptive immunity activation following vaccination and symptomatic infections, but not asymptomatic infections. These data, offered with a web interface, may guide the development of improved vaccines. The effects of vaccines on human dendritic cells (DCs) are incompletely understood. Here the authors build a transcriptional modular network based on in vitroinfection of human DCs and apply it for the characterization of the DC response to 13 different vaccines.
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      headline:Transcriptional specialization of human dendritic cell subsets in response to microbial vaccines
      description:The mechanisms by which microbial vaccines interact with human APCs remain elusive. Herein, we describe the transcriptional programs induced in human DCs by pathogens, innate receptor ligands and vaccines. Exposure of DCs to influenza, Salmonella enterica and Staphylococcus aureus allows us to build a modular framework containing 204 transcript clusters. We use this framework to characterize the responses of human monocytes, monocyte-derived DCs and blood DC subsets to 13 vaccines. Different vaccines induce distinct transcriptional programs based on pathogen type, adjuvant formulation and APC targeted. Fluzone, Pneumovax and Gardasil, respectively, activate monocyte-derived DCs, monocytes and CD1c+ blood DCs, highlighting APC specialization in response to vaccines. Finally, the blood signatures from individuals vaccinated with Fluzone or infected with influenza reveal a signature of adaptive immunity activation following vaccination and symptomatic infections, but not asymptomatic infections. These data, offered with a web interface, may guide the development of improved vaccines. The effects of vaccines on human dendritic cells (DCs) are incompletely understood. Here the authors build a transcriptional modular network based on in vitroinfection of human DCs and apply it for the characterization of the DC response to 13 different vaccines.
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         name:Sidra Medical and Research Center, Qatar
         type:PostalAddress
      name:Baylor Institute for Immunology Research
      address:
         name:Baylor Institute for Immunology Research, Dallas, USA
         type:PostalAddress
      name:Jackson Laboratory for Genomic Medicine
      address:
         name:Jackson Laboratory for Genomic Medicine, Farmington, USA
         type:PostalAddress
      name:Baylor Institute for Immunology Research
      address:
         name:Baylor Institute for Immunology Research, Dallas, USA
         type:PostalAddress
      name:Jackson Laboratory for Genomic Medicine
      address:
         name:Jackson Laboratory for Genomic Medicine, Farmington, USA
         type:PostalAddress
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      address:
         name:Baylor Institute for Immunology Research, Dallas, USA
         type:PostalAddress
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Person:
      name:Romain Banchereau
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
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      name:Nicole Baldwin
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
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      name:Alma-Martina Cepika
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Shruti Athale
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Yaming Xue
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Chun I Yu
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Patrick Metang
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
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      name:Abhilasha Cheruku
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
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      name:Isabelle Berthier
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Ingrid Gayet
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Yuanyuan Wang
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Marina Ohouo
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:LuAnn Snipes
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Hui Xu
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Gerlinde Obermoser
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
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      name:Derek Blankenship
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Sangkon Oh
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      name:Octavio Ramilo
      affiliation:
            name:Nationwide Children’s Hospital
            address:
               name:Nationwide Children’s Hospital, Columbus, USA
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      affiliation:
            name:Benaroya Research Institute
            address:
               name:Benaroya Research Institute, Seattle, USA
               type:PostalAddress
            type:Organization
            name:Sidra Medical and Research Center
            address:
               name:Sidra Medical and Research Center, Qatar
               type:PostalAddress
            type:Organization
      name:Jacques Banchereau
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
            name:Jackson Laboratory for Genomic Medicine
            address:
               name:Jackson Laboratory for Genomic Medicine, Farmington, USA
               type:PostalAddress
            type:Organization
      name:Karolina Palucka
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
            name:Jackson Laboratory for Genomic Medicine
            address:
               name:Jackson Laboratory for Genomic Medicine, Farmington, USA
               type:PostalAddress
            type:Organization
      name:Virginia Pascual
      affiliation:
            name:Baylor Institute for Immunology Research
            address:
               name:Baylor Institute for Immunology Research, Dallas, USA
               type:PostalAddress
            type:Organization
      email:[email protected]
PostalAddress:
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Nationwide Children’s Hospital, Columbus, USA
      name:Benaroya Research Institute, Seattle, USA
      name:Sidra Medical and Research Center, Qatar
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Jackson Laboratory for Genomic Medicine, Farmington, USA
      name:Baylor Institute for Immunology Research, Dallas, USA
      name:Jackson Laboratory for Genomic Medicine, Farmington, USA
      name:Baylor Institute for Immunology Research, Dallas, USA

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