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Title:
Bioconductor - dorothea
Description:
DoRothEA is a gene regulatory network containing signed transcription factor (TF) - target gene interactions. DoRothEA regulons, the collection of a TF and its transcriptional targets, were curated and collected from different types of evidence for both human and mouse. A confidence level was assigned to each TF-target interaction based on the number of supporting evidence.
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Keywords {🔍}
bioconductor, package, dorothea, packages, version, regulons, release, badiaimompel, source, human, transcription, factor, orcid, aut, holland, ctb, enter, saezrodriguez, activities, install, license, reports, binary, learn, developers, started, collection, mouse, doi, gene, evidence, pau, dimitrov, garciaalonso, resources, estimation, müllerdott, flores, ror, decoupler, installation, start, documentation, system, text, details, url, macos, repository, git,
Topics {✒️}
org/packages/dorothea source repository /saezlab/dorothea bug reports joint galaxy/bioconductor conference bioconductor release high-confidence prior knowledge tf-target interaction based source package luz garcia-alonso [aut] badia-i-mompel source repository release bioconductor support site transcription factor activities signed transcription factor alberto valdeolivas [ctb] minoo ashtiani [ctb] infer biological activities gene regulatory network script reference manual package installed git clone https /saezlab/dorothea/issues gz windows binary details biocviews io/dorothea/ https decoupler system requirements package packages started install garcia-alonso bioconductor //bioconductor dorothea regulons confidence level resources macos binary registration open transcriptional targets uni-heidelberg saez-rodriguez � genome research santiago jv müller-dott holland ch flores ror computational methods omics data � bioinformatics advances 1093/bioadv/vbac016 quietly = true
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