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We are analyzing https://link.springer.com/article/10.1186/gm415.

Title:
De novo truncating mutations in ASXL3 are associated with a novel clinical phenotype with similarities to Bohring-Opitz syndrome | Genome Medicine
Description:
Background Molecular diagnostics can resolve locus heterogeneity underlying clinical phenotypes that may otherwise be co-assigned as a specific syndrome based on shared clinical features, and can associate phenotypically diverse diseases to a single locus through allelic affinity. Here we describe an apparently novel syndrome, likely caused by de novo truncating mutations in ASXL3, which shares characteristics with Bohring-Opitz syndrome, a disease associated with de novo truncating mutations in ASXL1. Methods We used whole-genome and whole-exome sequencing to interrogate the genomes of four subjects with an undiagnosed syndrome. Results Using genome-wide sequencing, we identified heterozygous, de novo truncating mutations in ASXL3, a transcriptional repressor related to ASXL1, in four unrelated probands. We found that these probands shared similar phenotypes, including severe feeding difficulties, failure to thrive, and neurologic abnormalities with significant developmental delay. Further, they showed less phenotypic overlap with patients who had de novo truncating mutations in ASXL1. Conclusion We have identified truncating mutations in ASXL3 as the likely cause of a novel syndrome with phenotypic overlap with Bohring-Opitz syndrome.
Website Age:
28 years and 1 months (reg. 1997-05-29).

Matching Content Categories {📚}

  • Science
  • Education
  • Social Networks

Content Management System {📝}

What CMS is link.springer.com built with?

Custom-built

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Traffic Estimate {📈}

What is the average monthly size of link.springer.com audience?

🌠 Phenomenal Traffic: 5M - 10M visitors per month


Based on our best estimate, this website will receive around 5,000,019 visitors per month in the current month.
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How Does Link.springer.com Make Money? {💸}

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Keywords {🔍}

asxl, mutations, novo, sequencing, dna, article, gene, mutation, additional, genome, truncating, syndrome, google, scholar, subjects, human, usa, figure, identified, file, subject, clinical, variants, cas, bos, illumina, pubmed, data, similar, severe, phenotype, phenotypic, nonsense, baylor, predicted, medicine, size, genes, minutes, performed, agilent, bohringopitz, volume, features, family, accordance, seconds, catalog, reaction, pcr,

Topics {✒️}

bio-x-act long mix severe intellectual disability gibbs max-planck-institute severe psychomotor retardation premature stop-codon mutations epstein-barr virus transformation presumptive disease-causing mutations article download pdf disease-causing nonsense mutations genome-wide mutation rates nebnext da-tailing module find disease-causing loci beckman coulter genomics high-quality nonsense mutation borderline low-set ears yy conducted high-throughput post-capture lm-pcr intellectual disability nonsense codon-harboring mrna remove low-quality reads post-translational protein modification severe psychomotor delay genomic dna samples genome-wide association studies pcr-based quality check pre-capture libraries bohring-opitz syndrome caused custom exon-capture reagent de novo mutations de novo rates reverse transcriptase-pcr experiments human protein-coding genes disease-causing mutations de novo variants full size image privacy choices/manage cookies premature termination codon severe feeding difficulties nonsense-mediated decay truncating asxl3 mutation low-set ears de novo observation high-throughput sequencing mosaic activating mutation burrows-wheeler aligner recessive cognitive disorders genome-wide sequencing reid sutton & richard full access bohring-opitz syndrome

Schema {🗺️}

WebPage:
      mainEntity:
         headline:De novo truncating mutations in ASXL3 are associated with a novel clinical phenotype with similarities to Bohring-Opitz syndrome
         description:Molecular diagnostics can resolve locus heterogeneity underlying clinical phenotypes that may otherwise be co-assigned as a specific syndrome based on shared clinical features, and can associate phenotypically diverse diseases to a single locus through allelic affinity. Here we describe an apparently novel syndrome, likely caused by de novo truncating mutations in ASXL3, which shares characteristics with Bohring-Opitz syndrome, a disease associated with de novo truncating mutations in ASXL1. We used whole-genome and whole-exome sequencing to interrogate the genomes of four subjects with an undiagnosed syndrome. Using genome-wide sequencing, we identified heterozygous, de novo truncating mutations in ASXL3, a transcriptional repressor related to ASXL1, in four unrelated probands. We found that these probands shared similar phenotypes, including severe feeding difficulties, failure to thrive, and neurologic abnormalities with significant developmental delay. Further, they showed less phenotypic overlap with patients who had de novo truncating mutations in ASXL1. We have identified truncating mutations in ASXL3 as the likely cause of a novel syndrome with phenotypic overlap with Bohring-Opitz syndrome.
         datePublished:2013-02-05T00:00:00Z
         dateModified:2013-02-05T00:00:00Z
         pageStart:1
         pageEnd:9
         license:http://creativecommons.org/licenses/by/2.0/
         sameAs:https://doi.org/10.1186/gm415
         keywords:
            Intellectual Disability
            Truncate Mutation
            Severe Psychomotor Retardation
            ASXL3 Mutation
            Beckman Coulter Genomic
            Human Genetics
            Metabolomics
            Bioinformatics
            Medicine/Public Health
            general
            Cancer Research
            Systems Biology
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               1756-994X
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                     address:
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                     name:Baylor College of Medicine
                     address:
                        name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
                        type:PostalAddress
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                     address:
                        name:Texas Children's Hospital, Houston, USA
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                        name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
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                        name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
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ScholarlyArticle:
      headline:De novo truncating mutations in ASXL3 are associated with a novel clinical phenotype with similarities to Bohring-Opitz syndrome
      description:Molecular diagnostics can resolve locus heterogeneity underlying clinical phenotypes that may otherwise be co-assigned as a specific syndrome based on shared clinical features, and can associate phenotypically diverse diseases to a single locus through allelic affinity. Here we describe an apparently novel syndrome, likely caused by de novo truncating mutations in ASXL3, which shares characteristics with Bohring-Opitz syndrome, a disease associated with de novo truncating mutations in ASXL1. We used whole-genome and whole-exome sequencing to interrogate the genomes of four subjects with an undiagnosed syndrome. Using genome-wide sequencing, we identified heterozygous, de novo truncating mutations in ASXL3, a transcriptional repressor related to ASXL1, in four unrelated probands. We found that these probands shared similar phenotypes, including severe feeding difficulties, failure to thrive, and neurologic abnormalities with significant developmental delay. Further, they showed less phenotypic overlap with patients who had de novo truncating mutations in ASXL1. We have identified truncating mutations in ASXL3 as the likely cause of a novel syndrome with phenotypic overlap with Bohring-Opitz syndrome.
      datePublished:2013-02-05T00:00:00Z
      dateModified:2013-02-05T00:00:00Z
      pageStart:1
      pageEnd:9
      license:http://creativecommons.org/licenses/by/2.0/
      sameAs:https://doi.org/10.1186/gm415
      keywords:
         Intellectual Disability
         Truncate Mutation
         Severe Psychomotor Retardation
         ASXL3 Mutation
         Beckman Coulter Genomic
         Human Genetics
         Metabolomics
         Bioinformatics
         Medicine/Public Health
         general
         Cancer Research
         Systems Biology
      image:
         https://media.springernature.com/lw1200/springer-static/image/art%3A10.1186%2Fgm415/MediaObjects/13073_2012_Article_440_Fig1_HTML.jpg
         https://media.springernature.com/lw1200/springer-static/image/art%3A10.1186%2Fgm415/MediaObjects/13073_2012_Article_440_Fig2_HTML.jpg
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         name:Genome Medicine
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            1756-994X
         volumeNumber:5
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      publisher:
         name:BioMed Central
         logo:
            url:https://www.springernature.com/app-sn/public/images/logo-springernature.png
            type:ImageObject
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      author:
            name:Matthew N Bainbridge
            affiliation:
                  name:Baylor College of Medicine
                  address:
                     name:Human Genome Sequencing Center, Baylor College of Medicine, Houston, USA
                     type:PostalAddress
                  type:Organization
                  name:Baylor College of Medicine
                  address:
                     name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Hao Hu
            affiliation:
                  name:Max-Planck-Institute for Molecular Genetics
                  address:
                     name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Donna M Muzny
            affiliation:
                  name:Baylor College of Medicine
                  address:
                     name:Human Genome Sequencing Center, Baylor College of Medicine, Houston, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Luciana Musante
            affiliation:
                  name:Max-Planck-Institute for Molecular Genetics
                  address:
                     name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:James R Lupski
            affiliation:
                  name:Baylor College of Medicine
                  address:
                     name:Human Genome Sequencing Center, Baylor College of Medicine, Houston, USA
                     type:PostalAddress
                  type:Organization
                  name:Baylor College of Medicine
                  address:
                     name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
                     type:PostalAddress
                  type:Organization
                  name:Baylor College of Medicine
                  address:
                     name:Department of Pediatrics, Baylor College of Medicine, Houston, USA
                     type:PostalAddress
                  type:Organization
                  name:Texas Children's Hospital
                  address:
                     name:Texas Children's Hospital, Houston, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Brett H Graham
            affiliation:
                  name:Baylor College of Medicine
                  address:
                     name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
                     type:PostalAddress
                  type:Organization
                  name:Texas Children's Hospital
                  address:
                     name:Texas Children's Hospital, Houston, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Wei Chen
            affiliation:
                  name:Max-Planck-Institute for Molecular Genetics
                  address:
                     name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
                     type:PostalAddress
                  type:Organization
                  name:Robert-Rössle-Straße
                  address:
                     name:Max-Delbrueck-Centrum für Molekulare Medizin, Robert-Rössle-Straße, Berlin, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Karen W Gripp
            affiliation:
                  name:AI duPont Hospital for Children
                  address:
                     name:AI duPont Hospital for Children, Wilmington, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Kim Jenny
            affiliation:
                  name:AI duPont Hospital for Children
                  address:
                     name:AI duPont Hospital for Children, Wilmington, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Thomas F Wienker
            affiliation:
                  name:Max-Planck-Institute for Molecular Genetics
                  address:
                     name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Yaping Yang
            affiliation:
                  name:Baylor College of Medicine
                  address:
                     name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:V Reid Sutton
            affiliation:
                  name:Baylor College of Medicine
                  address:
                     name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
                     type:PostalAddress
                  type:Organization
                  name:Texas Children's Hospital
                  address:
                     name:Texas Children's Hospital, Houston, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Richard A Gibbs
            affiliation:
                  name:Baylor College of Medicine
                  address:
                     name:Human Genome Sequencing Center, Baylor College of Medicine, Houston, USA
                     type:PostalAddress
                  type:Organization
                  name:Baylor College of Medicine
                  address:
                     name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
                     type:PostalAddress
                  type:Organization
            email:[email protected]
            type:Person
            name:H Hilger Ropers
            affiliation:
                  name:Max-Planck-Institute for Molecular Genetics
                  address:
                     name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
                     type:PostalAddress
                  type:Organization
            email:[email protected]
            type:Person
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      name:Genome Medicine
      issn:
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      volumeNumber:5
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      name:BioMed Central
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         url:https://www.springernature.com/app-sn/public/images/logo-springernature.png
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      name:Baylor College of Medicine
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         name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
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         name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
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         name:Department of Pediatrics, Baylor College of Medicine, Houston, USA
         type:PostalAddress
      name:Texas Children's Hospital
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         name:Texas Children's Hospital, Houston, USA
         type:PostalAddress
      name:Baylor College of Medicine
      address:
         name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
         type:PostalAddress
      name:Texas Children's Hospital
      address:
         name:Texas Children's Hospital, Houston, USA
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      name:AI duPont Hospital for Children
      address:
         name:AI duPont Hospital for Children, Wilmington, USA
         type:PostalAddress
      name:AI duPont Hospital for Children
      address:
         name:AI duPont Hospital for Children, Wilmington, USA
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      address:
         name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
         type:PostalAddress
      name:Baylor College of Medicine
      address:
         name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
         type:PostalAddress
      name:Baylor College of Medicine
      address:
         name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
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      address:
         name:Texas Children's Hospital, Houston, USA
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      address:
         name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
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            name:Baylor College of Medicine
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               name:Human Genome Sequencing Center, Baylor College of Medicine, Houston, USA
               type:PostalAddress
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            name:Baylor College of Medicine
            address:
               name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
               type:PostalAddress
            type:Organization
      name:Hao Hu
      affiliation:
            name:Max-Planck-Institute for Molecular Genetics
            address:
               name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
               type:PostalAddress
            type:Organization
      name:Donna M Muzny
      affiliation:
            name:Baylor College of Medicine
            address:
               name:Human Genome Sequencing Center, Baylor College of Medicine, Houston, USA
               type:PostalAddress
            type:Organization
      name:Luciana Musante
      affiliation:
            name:Max-Planck-Institute for Molecular Genetics
            address:
               name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
               type:PostalAddress
            type:Organization
      name:James R Lupski
      affiliation:
            name:Baylor College of Medicine
            address:
               name:Human Genome Sequencing Center, Baylor College of Medicine, Houston, USA
               type:PostalAddress
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            name:Baylor College of Medicine
            address:
               name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
               type:PostalAddress
            type:Organization
            name:Baylor College of Medicine
            address:
               name:Department of Pediatrics, Baylor College of Medicine, Houston, USA
               type:PostalAddress
            type:Organization
            name:Texas Children's Hospital
            address:
               name:Texas Children's Hospital, Houston, USA
               type:PostalAddress
            type:Organization
      name:Brett H Graham
      affiliation:
            name:Baylor College of Medicine
            address:
               name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
               type:PostalAddress
            type:Organization
            name:Texas Children's Hospital
            address:
               name:Texas Children's Hospital, Houston, USA
               type:PostalAddress
            type:Organization
      name:Wei Chen
      affiliation:
            name:Max-Planck-Institute for Molecular Genetics
            address:
               name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
               type:PostalAddress
            type:Organization
            name:Robert-Rössle-Straße
            address:
               name:Max-Delbrueck-Centrum für Molekulare Medizin, Robert-Rössle-Straße, Berlin, Germany
               type:PostalAddress
            type:Organization
      name:Karen W Gripp
      affiliation:
            name:AI duPont Hospital for Children
            address:
               name:AI duPont Hospital for Children, Wilmington, USA
               type:PostalAddress
            type:Organization
      name:Kim Jenny
      affiliation:
            name:AI duPont Hospital for Children
            address:
               name:AI duPont Hospital for Children, Wilmington, USA
               type:PostalAddress
            type:Organization
      name:Thomas F Wienker
      affiliation:
            name:Max-Planck-Institute for Molecular Genetics
            address:
               name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
               type:PostalAddress
            type:Organization
      name:Yaping Yang
      affiliation:
            name:Baylor College of Medicine
            address:
               name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
               type:PostalAddress
            type:Organization
      name:V Reid Sutton
      affiliation:
            name:Baylor College of Medicine
            address:
               name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
               type:PostalAddress
            type:Organization
            name:Texas Children's Hospital
            address:
               name:Texas Children's Hospital, Houston, USA
               type:PostalAddress
            type:Organization
      name:Richard A Gibbs
      affiliation:
            name:Baylor College of Medicine
            address:
               name:Human Genome Sequencing Center, Baylor College of Medicine, Houston, USA
               type:PostalAddress
            type:Organization
            name:Baylor College of Medicine
            address:
               name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
               type:PostalAddress
            type:Organization
      email:[email protected]
      name:H Hilger Ropers
      affiliation:
            name:Max-Planck-Institute for Molecular Genetics
            address:
               name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
               type:PostalAddress
            type:Organization
      email:[email protected]
PostalAddress:
      name:Human Genome Sequencing Center, Baylor College of Medicine, Houston, USA
      name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
      name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
      name:Human Genome Sequencing Center, Baylor College of Medicine, Houston, USA
      name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
      name:Human Genome Sequencing Center, Baylor College of Medicine, Houston, USA
      name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
      name:Department of Pediatrics, Baylor College of Medicine, Houston, USA
      name:Texas Children's Hospital, Houston, USA
      name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
      name:Texas Children's Hospital, Houston, USA
      name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
      name:Max-Delbrueck-Centrum für Molekulare Medizin, Robert-Rössle-Straße, Berlin, Germany
      name:AI duPont Hospital for Children, Wilmington, USA
      name:AI duPont Hospital for Children, Wilmington, USA
      name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany
      name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
      name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
      name:Texas Children's Hospital, Houston, USA
      name:Human Genome Sequencing Center, Baylor College of Medicine, Houston, USA
      name:Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA
      name:Max-Planck-Institute for Molecular Genetics, Ihnestraße, Germany

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