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Keywords {🔍}

klf, genes, escs, expression, cells, pubmed, article, additional, google, scholar, cell, file, stem, data, esc, analysis, undifferentiated, differentiation, figure, targets, cas, embryonic, gene, transcription, factor, mouse, primary, control, expressed, binding, qpcr, usa, results, transfected, role, regulated, keratinocytes, state, factors, microarray, target, fold, found, central, transfection, significant, showed, relative, serpine, krüppellike,

Topics {✒️}

lucio pastore & tommaso russo cg-rich elements article download pdf real-time rt-pcr cell-specific transcriptional complexes direct high-throughput sequencing mouse monoclonal anti-flag dana-farber cancer institute p-cba-flag vector lif/stat3 transcriptional targets cloned downstream flag-tag klf5-based regulation concerns transcriptional regulatory networks embryonic stem cells embryonic stem cell full size image klf5-specific gene regulation flag-runx1-expressing cells germ layers author information authors master regulatory factors klf5-dependent gene regulation leukemia inhibitory factor motif-finding cisfinder software murine embryonic stem embryonic founder cells gp130-mediated signaling real-time pcr flag-runx1-transfected cells transcriptional networks governed cell stem cell related subjects privacy choices/manage cookies pluripotent stem cells klf5-target genes obtained anti-flag antibody show indirect transcriptional targets loh yh teratocarcinoma stem cells selected klf5-target genes full access full size table chip-seq bioinformatics analysis european economic area high-throughput sequencing 1 mm β-mercaptoethanol direct target genes esc undifferentiated state expression profiles target promoter occupancy

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         headline:Direct targets of Klf5 transcription factor contribute to the maintenance of mouse embryonic stem cell undifferentiated state
         description:A growing body of evidence has shown that Krüppel-like transcription factors play a crucial role in maintaining embryonic stem cell (ESC) pluripotency and in governing ESC fate decisions. Krüppel-like factor 5 (Klf5) appears to play a critical role in these processes, but detailed knowledge of the molecular mechanisms of this function is still not completely addressed. By combining genome-wide chromatin immunoprecipitation and microarray analysis, we have identified 161 putative primary targets of Klf5 in ESCs. We address three main points: (1) the relevance of the pathways governed by Klf5, demonstrating that suppression or constitutive expression of single Klf5 targets robustly affect the ESC undifferentiated phenotype; (2) the specificity of Klf5 compared to factors belonging to the same family, demonstrating that many Klf5 targets are not regulated by Klf2 and Klf4; and (3) the specificity of Klf5 function in ESCs, demonstrated by the significant differences between Klf5 targets in ESCs compared to adult cells, such as keratinocytes. Taken together, these results, through the definition of a detailed list of Klf5 transcriptional targets in mouse ESCs, support the important and specific functional role of Klf5 in the maintenance of the undifferentiated ESC phenotype. See: http://www.biomedcental.com/1741-7007/8/125
         datePublished:2010-09-27T00:00:00Z
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            Leukemia Inhibitory Factor
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            Mouse ESCs
            Klf5 Expression
            Life Sciences
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      headline:Direct targets of Klf5 transcription factor contribute to the maintenance of mouse embryonic stem cell undifferentiated state
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         Leukemia Inhibitory Factor
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      name:CEINGE Biotecnologie Avanzate, Naples, Italy
      name:European School of Molecular Medicine (SEMM), Naples, Italy
      name:Dipartimento di Biochimica e Biotecnologie Mediche, Università di Napoli "Federico II", Naples, Italy
      name:CEINGE Biotecnologie Avanzate, Naples, Italy
      name:Dipartimento di Biochimica e Biotecnologie Mediche, Università di Napoli "Federico II", Naples, Italy
      name:CEINGE Biotecnologie Avanzate, Naples, Italy
      name:Dipartimento di Biochimica e Biotecnologie Mediche, Università di Napoli "Federico II", Naples, Italy

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