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Title[redir]:
Correlation of circular RNA abundance with proliferation β exemplified with colorectal and ovarian cancer, idiopathic lung fibrosis, and normal human tissues - PMC
Description:
Circular RNAs are a recently (re-)discovered abundant RNA species with presumed function as miRNA sponges, thus part of the competing endogenous RNA network. We analysed the expression of circular and linear RNAs and proliferation in matched normal ...
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Keywords {π}
normal, circrnas, tissues, tumour, circrna, cancer, samples, cell, crc, expression, circular, linear, supplementary, rna, rnas, compared, mucosa, proliferation, cells, lines, data, reads, circ, doi, google, scholar, colon, backsplice, pubmed, rnase, fig, correlation, rnaseq, index, table, pmc, tissue, ratios, human, mirnas, ovarian, mki, article, gene, patients, circrnalinrna, colorectal, analysis, transcripts, expressed,
Topics {βοΈ}
οΏ½m formalin-fixed paraffin-embedded nucleotide gu-rich element [google scholar] pritchard pmc beta search biological raison d'Γͺtre fast gapped-read alignment random back-splice events3 post-hoc nemenyi test back-splice aware mapper rna-seq alignment algorithms overlapping back-splice junctions cancerous neo-proliferative disease rna-seq unified mapper identified back-splice junctions proto-oncogene sv40 large rna-seq data sets back-splice reads multiplied obtained back-splice junctions multi-split mapping algorithm y-axis log2 scale back-splice reads divided subsequent qiazol/chloroform extraction htseq-count mode βunion' back-splice supporting reads high-throughput sequencing data intronic lariat-originated circrnas induce mirna-mediated degradation rna-seq data set author contributions sequence read archive r-package samr v2 back-splice reads based rrna depleted rna-seq cell-type specific features license information pmcid r-package poissonseq v1 highly significant p-values specific rt-qpcr systems back-splice events 758 back-splice events rna-seq dataset comprised collecting clinical information rneasy mini kit taqman probe numbers publisher site pdf supplementary materials included specific splice events newly identified member back-splice junctions 734 back-splice junctions
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