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Keywords {🔍}

mats, release, rmats, data, splicing, beta, alternative, fixed, bug, related, replicate, rnaseq, events, version, download, xing, major, works, reads, differential, improved, macos, exons, added, detection, bowtie, files, gene, analysis, read, update, important, features, samtools, tested, optimization, detect, design, procedure, paired, tophat, bam, expression, file, annotation, types, statistical, shen, park, doi,

Topics {✒️}

designing rt-pcr primers raw rna-seq data replicate rna-seq data gene/transcript annotation file exon-exon junction reads detects micro-exons involved rna-seq data differential alternative splicing handles junction reads rna sequencing data alternative splicing events alternative splicing patterns user-defined threshold replicate data support strand-specific data exon body reads los angeles home deprecated -expressionchange option default insert sizes unpaired study design mapped reads files genome sequence file nucleic acids research false discovery rate improved filtering system read sequence files important features added primer design tool simplified running procedure likelihood-ratio test improved statistical power adds ensembl version calculate p-values developed replicate mats paired replicate model read mapping step transcript splicing software download release numerical optimization optimization procedure automatically detect mouse annotation bam files multi-exon statistical model install bowtie spanning reads event file automatically detects replicate mats

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