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Keywords {🔍}

mats, release, splicing, data, alternative, replicate, rnaseq, beta, fixed, bug, related, xing, rmats, download, version, events, differential, improved, macos, bowtie, files, gene, major, shen, park, analysis, detect, design, procedure, paired, tophat, running, bam, expression, added, works, reads, file, annotation, types, statistical, doi, install, uclaedu, transcript, lab, primerseq, tool, output, optimization,

Topics {✒️}

designing rt-pcr primers raw rna-seq data replicate rna-seq data exon-exon junction reads gene/transcript annotation file rna-seq data differential alternative splicing rna sequencing data alternative splicing events alternative splicing patterns exon body reads user-defined threshold replicate data support mapped reads files los angeles home default insert sizes unpaired study design read sequence files genome sequence file nucleic acids research false discovery rate improved filtering system primer design tool likelihood-ratio test improved statistical power important features added juw won park adds ensembl version read mapping step simplified running procedure calculate p-values developed replicate mats paired replicate model transcript splicing software download release optimization procedure automatically detect xing lab mouse annotation bam files statistical model install bowtie event file replicate mats install samtools bug related 1007/978-1-62703-514-9_10 shen computational tool isoform ratio multivariate analysis

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