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rbat, cell, fig, expression, pubmed, lines, tumor, cancer, rna, cells, google, scholar, supplementary, promoter, hnrnpl, cas, retinoblastoma, bca, lncrna, analysis, gapmer, performed, gene, genes, noncoding, control, tissues, lncrnas, bladder, central, data, region, protein, proliferation, werirb, assays, number, pcr, results, formation, long, realtime, tumors, showed, table, potential, significantly, transcription, silencing, assay,

Topics {✒️}

mir-106a-5p/e2f3 axis y-axis represents log g0/g1 phase increased noncoding rna revolution-trashing poly-l-lysine-coated 6 rna-directed proteomic discovery real-time pcr showing stage ii/iii/iv anti-rna polymerase-ii real-time pcr showed rnase-h-mediated degradation liver tumour-initiating cells article download pdf shrna-expressing plasmid construction streptavidin-conjugated magnet beads lna-modified antisense oligonucleotides nuclear/cytosol fractionation kit axis represents log primescript rt-pcr kit real-time qpcr analysis alternative splicing events real-time pcr analysis cell cycle-dependent expression nf-kb signaling pathway kaplan-meier survival analysis stat3-mediated sox4 expression wild-type rb protein triple-negative breast cancer firefly/renilla luciferase assays rbat1-induced e2f3 activation e2f3-silencing significantly reduced seventeen chirp-purified proteins blue points denote real-time pcr confirmed intestinal epithelial differentiation understanding rna-chromatin interactions lncrna-rbat/hnrnpl complex tcf7-targeted shrna resulted gene expression profiles coding rna sammson e2f3-overexpressing cell lines red points denote regulates cell growth scientific research program sv-huc-1 cell lines identify rbat1-interacting proteins e2f3-overexpressed cell lines gapmer-mediated silencing privacy choices/manage cookies long noncoding rnas

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         headline:A novel LncRNA transcript, RBAT1, accelerates tumorigenesis through interacting with HNRNPL and cis-activating E2F3
         description:Long non-coding RNAs (lncRNAs) have been identified as important epigenetic regulators that play critical roles in human cancers. However, the regulatory functions of lncRNAs in tumorigenesis remains to be elucidated. Here, we aimed to investigate the molecular mechanisms and potential clinical application of a novel lncRNA, retinoblastoma associated transcript-1 (RBAT1), in tumorigenesis. RBAT1 expression was determined by real-time PCR in both retinoblastoma (Rb) and bladder cancer (BCa) cell lines and clinical tissues. Chromatin isolation using RNA purification (ChIRP) assays were performed to identify RBAT1-interacting proteins. Patient-derived xenograft (PDX) retinoblastoma models were established to test the therapeutic potential of RBAT1-targeting GapmeRs. Here, we found that RBAT1 expression was significantly higher in Rb and BCa tissues than that in adjacent tissues. Functional assays revealed that RBAT1 accelerated tumorigenesis both in vitro and in vivo. Mechanistically, RBAT1 recruited HNRNPL protein to E2F3 promoter, thereby activating E2F3 transcription. Therapeutically, GapmeR-mediated RBAT1 silencing significantly inhibited tumorigenesis in orthotopic xenograft retinoblastoma models derived from Rb cell lines and Rb primary cells. RBAT1 overexpression upregulates a known oncogene, E2F3, via directly recruiting HNPNPL to its promoter and cis-activating its expression. Our finding provides a novel mechanism of lncRNA biology and provides potential targets for diagnosis and treatment of Rb and BCa.
         datePublished:2020-07-15T00:00:00Z
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      headline:A novel LncRNA transcript, RBAT1, accelerates tumorigenesis through interacting with HNRNPL and cis-activating E2F3
      description:Long non-coding RNAs (lncRNAs) have been identified as important epigenetic regulators that play critical roles in human cancers. However, the regulatory functions of lncRNAs in tumorigenesis remains to be elucidated. Here, we aimed to investigate the molecular mechanisms and potential clinical application of a novel lncRNA, retinoblastoma associated transcript-1 (RBAT1), in tumorigenesis. RBAT1 expression was determined by real-time PCR in both retinoblastoma (Rb) and bladder cancer (BCa) cell lines and clinical tissues. Chromatin isolation using RNA purification (ChIRP) assays were performed to identify RBAT1-interacting proteins. Patient-derived xenograft (PDX) retinoblastoma models were established to test the therapeutic potential of RBAT1-targeting GapmeRs. Here, we found that RBAT1 expression was significantly higher in Rb and BCa tissues than that in adjacent tissues. Functional assays revealed that RBAT1 accelerated tumorigenesis both in vitro and in vivo. Mechanistically, RBAT1 recruited HNRNPL protein to E2F3 promoter, thereby activating E2F3 transcription. Therapeutically, GapmeR-mediated RBAT1 silencing significantly inhibited tumorigenesis in orthotopic xenograft retinoblastoma models derived from Rb cell lines and Rb primary cells. RBAT1 overexpression upregulates a known oncogene, E2F3, via directly recruiting HNPNPL to its promoter and cis-activating its expression. Our finding provides a novel mechanism of lncRNA biology and provides potential targets for diagnosis and treatment of Rb and BCa.
      datePublished:2020-07-15T00:00:00Z
      dateModified:2020-07-15T00:00:00Z
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         Oncology
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      name:Peiwei Chai
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            address:
               name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
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            name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology
            address:
               name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
               type:PostalAddress
            type:Organization
      name:Fang Li
      affiliation:
            name:Shanghai JiaoTong University School of Medicine
            address:
               name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
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            address:
               name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
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            address:
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               type:PostalAddress
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      affiliation:
            name:Shanghai JiaoTong University School of Medicine
            address:
               name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
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            name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology
            address:
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            name:Shanghai JiaoTong University School of Medicine
            address:
               name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
               type:PostalAddress
            type:Organization
            name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology
            address:
               name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
               type:PostalAddress
            type:Organization
      name:Yingxiu Luo
      affiliation:
            name:Shanghai JiaoTong University School of Medicine
            address:
               name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
               type:PostalAddress
            type:Organization
            name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology
            address:
               name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
               type:PostalAddress
            type:Organization
      name:Shengfang Ge
      affiliation:
            name:Shanghai JiaoTong University School of Medicine
            address:
               name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
               type:PostalAddress
            type:Organization
            name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology
            address:
               name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
               type:PostalAddress
            type:Organization
      name:He Zhang
      affiliation:
            name:Shanghai JiaoTong University School of Medicine
            address:
               name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
               type:PostalAddress
            type:Organization
            name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology
            address:
               name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
               type:PostalAddress
            type:Organization
      email:[email protected]
      name:Renbing Jia
      affiliation:
            name:Shanghai JiaoTong University School of Medicine
            address:
               name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
               type:PostalAddress
            type:Organization
            name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology
            address:
               name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
               type:PostalAddress
            type:Organization
      email:[email protected]
      name:Xianqun Fan
      affiliation:
            name:Shanghai JiaoTong University School of Medicine
            address:
               name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
               type:PostalAddress
            type:Organization
            name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology
            address:
               name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
               type:PostalAddress
            type:Organization
      email:[email protected]
PostalAddress:
      name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
      name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
      name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
      name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
      name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
      name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
      name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
      name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
      name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
      name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
      name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
      name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
      name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
      name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
      name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
      name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
      name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
      name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
      name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
      name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
      name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
      name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
      name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
      name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China
      name:Department of Ophthalmology, Ninth People’s Hospital, Shanghai JiaoTong University School of Medicine, Shanghai, China
      name:Shanghai Key Laboratory of Orbital Diseases and Ocular Oncology, Shanghai, China

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