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Title:
Cumulative association of eight susceptibility genes with systemic lupus erythematosus in a Japanese female population | Journal of Human Genetics
Description:
Although large-scale studies established many susceptibility genes to systemic lupus erythematosus (SLE), effect of each gene is not sufficiently large to be used alone to identify individuals with strong genetic predisposition. In this study, we analyzed the cumulative number of risk alleles at eight established susceptibility loci, HLA-DRB1, IRF5, STAT4, BLK, TNFAIP3, TNIP1, FCGR2B and TNFSF13, in 282 Japanese female SLE and 222 healthy female controls. The average number of risk alleles was significantly increased in SLE (8.07±1.60) than healthy controls (7.02±1.64) (P=1.63 × 10−12). Significant gene–gene interaction was not detected. When the subjects carrying seven risk alleles were used as a reference, the odds ratio (OR) for individuals carrying 10 and 11–13 risk alleles were 4.17 (95% confidence interval (CI) 1.89–9.19, P=0.0002) and 8.77 (95% CI 1.92–40.0, P=0.0016), respectively. In contrast, subjects with ⩽4 risk alleles were significantly decreased in SLE (OR 0.15, CI 0.03–0.67, P=0.007). The proportion of the patients with neurologic disorder was significantly increased in those carrying ⩾10 risk alleles than those with <10 (OR 2.30, CI 1.09–4.83, P=0.025). This study suggested that the cumulative number of risk alleles may efficiently distinguish groups with high and low genetic predisposition to SLE and its severe manifestation.
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headline:Cumulative association of eight susceptibility genes with systemic lupus erythematosus in a Japanese female population
description:Although large-scale studies established many susceptibility genes to systemic lupus erythematosus (SLE), effect of each gene is not sufficiently large to be used alone to identify individuals with strong genetic predisposition. In this study, we analyzed the cumulative number of risk alleles at eight established susceptibility loci, HLA-DRB1, IRF5, STAT4, BLK, TNFAIP3, TNIP1, FCGR2B and TNFSF13, in 282 Japanese female SLE and 222 healthy female controls. The average number of risk alleles was significantly increased in SLE (8.07±1.60) than healthy controls (7.02±1.64) (P=1.63 à 10â12). Significant geneâgene interaction was not detected. When the subjects carrying seven risk alleles were used as a reference, the odds ratio (OR) for individuals carrying 10 and 11â13 risk alleles were 4.17 (95% confidence interval (CI) 1.89â9.19, P=0.0002) and 8.77 (95% CI 1.92â40.0, P=0.0016), respectively. In contrast, subjects with ⩽4 risk alleles were significantly decreased in SLE (OR 0.15, CI 0.03â0.67, P=0.007). The proportion of the patients with neurologic disorder was significantly increased in those carrying ⩾10 risk alleles than those with <10 (OR 2.30, CI 1.09â4.83, P=0.025). This study suggested that the cumulative number of risk alleles may efficiently distinguish groups with high and low genetic predisposition to SLE and its severe manifestation.
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genetic risk score
polymorphism
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Human Genetics
Molecular Medicine
Gene Function
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name:Division of Clinical Immunology, Doctoral Program in Clinical Sciences, Graduate School of Comprehensive Human Sciences, University of Tsukuba, Tsukuba, Japan
name:Division of Rheumatology, Department of Internal Medicine, Juntendo University, Tokyo, Japan
name:Division of Rheumatology, Department of Internal Medicine, Juntendo University, Tokyo, Japan
name:Juntendo University School of Medicine, Tokyo, Japan
name:Division of Clinical Immunology, Doctoral Program in Clinical Sciences, Graduate School of Comprehensive Human Sciences, University of Tsukuba, Tsukuba, Japan
name:Molecular and Genetic Epidemiology Laboratory, Doctoral Program in Biomedical Sciences, Graduate School of Comprehensive Human Sciences, University of Tsukuba, Tsukuba, Japan
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