
BIOCONDUCTOR . ORG {
}
Title:
Bioconductor - fission
Description:
This package provides a RangedSummarizedExperiment object of read counts in genes for a time course RNA-Seq experiment of fission yeast (Schizosaccharomyces pombe) in response to oxidative stress (1M sorbitol treatment) at 0, 15, 30, 60, 120 and 180 mins. The samples are further divided between a wild-type group and a group with deletion of atf21. The read count matrix was prepared and provided by the author of the study: Leong HS, Dawson K, Wirth C, Li Y, Connolly Y, Smith DL, Wilkinson CR, Miller CJ.
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Keywords {🔍}
bioconductor, package, fission, packages, version, yeast, response, stress, release, system, source, time, leong, nat, commun, enter, install, binary, learn, developers, started, experiment, rangedsummarizedexperiment, rnaseq, read, group, author, dawson, wirth, connolly, smith, wilkinson, miller, global, noncoding, rna, modulates, protein, levels, geo, michael, love, installation, start, documentation, details, url, macos, repository, git,
Topics {✒️}
org/packages/fission source repository joint galaxy/bioconductor conference bioconductor release source package rna-seq experiment source repository release bioconductor support site fission yeast time 1m sorbitol treatment script reference manual git clone https read count matrix package installed gz windows binary fission yeast wild-type group details biocviews rna-seq system requirements packages started install package bioconductor //bioconductor system read counts macos binary registration open nat commun 2014 schizosaccharomyces pombe � nat commun gov/pubmed/24853205 quietly = true older versions lgpl depends summarizedexperiment imports developer access download stats released version devel version sequencingdata version org rangedsummarizedexperiment object smith dl wilkinson cr miller cj view documentation fission install
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