BIOCONDUCTOR . ORG {
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Title:
Bioconductor - zitools
Description:
zitools allows for zero inflated count data analysis by either using down-weighting of excess zeros or by replacing an appropriate proportion of excess zeros with NA. Through overloading frequently used statistical functions (such as mean, median, standard deviation), plotting functions (such as boxplots or heatmap) or differential abundance tests, it allows a wide range of downstream analyses for zero-inflated data in a less biased manner. This becomes applicable in the context of microbiome analyses, where the data is often overdispersed and zero-inflated, therefore making data analysis extremly challenging.
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Keywords {🔍}
bioconductor, package, zitools, version, packages, data, analysis, zeroinflated, release, source, count, meyring, enter, install, license, reports, binary, learn, developers, started, software, excess, zeros, functions, analyses, microbiome, carlotta, httpsbioconductororgpackageszitools, installation, start, documentation, system, pdf, text, details, bioc, stats, url, macos, zitoolstgz, repository, git, clone, code, registration, open, gbcc, joint, galaxybioconductor, conference,
Topics {✒️}
/kreutz-lab/zitools bug reports org/packages/zitools source repository joint galaxy/bioconductor conference /kreutz-lab/zitools/issues bioconductor release tgz source repository source package org/packages/zitools release //code inflated count data bioconductor support site differential abundance tests script reference manual gz windows binary package installed package version 1 tgz macos binary git clone https carlotta meyring [aut details biocviews utils system requirements package started install packages inflated data macos binary //bioconductor bioconductor registration open excess zeros overloading frequently statistical functions standard deviation plotting functions wide range downstream analyses biased manner cre] orcid uniklinik-freiburg quietly = true older versions methods imports developer access org released version devel version statisticalmethod version text license microbiome analyses
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