BIOCONDUCTOR . ORG {
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Title:
Bioconductor - wppi
Description:
Protein-protein interaction data is essential for omics data analysis and modeling. Database knowledge is general, not specific for cell type, physiological condition or any other context determining which connections are functional and contribute to the signaling. Functional annotations such as Gene Ontology and Human Phenotype Ontology might help to evaluate the relevance of interactions. This package predicts functional relevance of protein-protein interactions based on functional annotations such as Human Protein Ontology and Gene Ontology, and prioritizes genes based on network topology, functional scores and a path search algorithm.
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Keywords {🔍}
package, bioconductor, version, packages, wppi, functional, proteinprotein, interactions, release, ontology, source, galhoz, aut, orcid, enter, install, license, reports, binary, learn, developers, search, started, software, weighting, data, annotations, gene, human, relevance, based, network, ana, turei, menden, httpsbioconductororgpackageswppi, installation, start, documentation, system, text, details, bioc, stats, url, macos, wppitgz, repository, git, clone,
Topics {✒️}
org/packages/wppi source repository /anagalhoz37/wppi bug reports joint galaxy/bioconductor conference weighting protein-protein interactions protein-protein interaction data protein-protein interactions based bioconductor release tgz source repository source package org/packages/wppi release //code human protein ontology bioconductor support site omics data analysis prioritizes genes based path search algorithm /anagalhoz37/wppi/issues albert krewinkel [ctb pagebreak lua filter script reference manual gz windows binary zip macos binary tgz macos binary human phenotype ontology package installed package version 1 git clone https ana galhoz [cre details biocviews tidyr system requirements started install package packages aut] orcid wppi workflow //bioconductor bioconductor gene ontology functional annotations functional scores registration open database knowledge cell type physiological condition context determining helmholtz-muenchen quietly = true older versions pdf news
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