
BIOCONDUCTOR . ORG {
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Title:
Bioconductor - velociraptor
Description:
This package provides Bioconductor-friendly wrappers for RNA velocity calculations in single-cell RNA-seq data. We use the basilisk package to manage Conda environments, and the zellkonverter package to convert data structures between SingleCellExperiment (R) and AnnData (Python). The information produced by the velocity methods is stored in the various components of the SingleCellExperiment class.
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Keywords {🔍}
package, bioconductor, version, packages, velociraptor, singlecell, velocity, release, aut, orcid, source, singlecellexperiment, ruealbrecht, enter, install, license, reports, binary, learn, developers, started, software, toolkit, data, basilisk, zellkonverter, methods, kevin, lun, soneson, stadler, httpsbioconductororgpackagesvelociraptor, installation, start, documentation, system, text, details, bioc, stats, url, macos, velociraptortgz, repository, git, clone, code, registration, open, gbcc,
Topics {✒️}
org/packages/velociraptor source repository /kevinrue/velociraptor bug reports single-cell rna-seq data joint galaxy/bioconductor conference bioconductor release kevin rue-albrecht [aut tgz source repository org/packages/velociraptor source package single-cell velocity bioconductor-friendly wrappers release rna velocity calculations convert data structures //code bioconductor support site /kevinrue/velociraptor/issues manage conda environments script reference manual gz windows binary tgz macos binary git clone https details biocviews biocsingular system requirements package installed package version 1 basilisk package zellkonverter package rue-albrecht started install packages cre] orcid package macos binary software version velocity methods //bioconductor bioconductor registration open information produced quietly = true older versions pdf news summarizedexperiment imports developer access org released version devel version text license view documentation
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