
BIOCONDUCTOR . ORG {
}
Title:
Bioconductor - tximport
Description:
Imports transcript-level abundance, estimated counts and transcript lengths, and summarizes into matrices for use with downstream gene-level analysis packages. Average transcript length, weighted by sample-specific transcript abundance estimates, is provided as a matrix which can be used as an offset for different expression of gene-level counts.
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23 years and 7 months (reg. 2001-11-19).
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Keywords {π}
bioconductor, package, packages, version, tximport, transcript, ctb, genelevel, release, source, transcriptlevel, estimates, abundance, love, enter, install, binary, learn, developers, started, software, analysis, imports, counts, michael, soneson, aut, robinson, rnaseq, installation, start, documentation, system, details, bioc, stats, url, macos, tximporttgz, repository, git, clone, reports, code, registration, open, gbcc, joint, galaxybioconductor, conference,
Topics {βοΈ}
org/packages/tximport source repository summarize transcript-level estimates joint galaxy/bioconductor conference imports transcript-level abundance bioconductor release tgz source repository source package gene-level counts release //code bioconductor support site average transcript length rob patro [ctb] matt shirley [ctb] script reference manual gz windows binary zip macos binary tgz macos binary package installed michael love [cre git clone https details biocviews methods system requirements mark robinson [aut] charlotte soneson [aut] package started install packages transcript lengths thompson [ctb] /thelovelab/tximport bioconductor //bioconductor love mi estimated counts robinson md org registration open οΏ½differential analyses rna-seq quietly = true older versions pdf news developer access released version devel version transcriptomics version transcript view documentation url
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