
BIOCONDUCTOR . ORG {
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Title:
Bioconductor - terapadog
Description:
This package performs a Gene Set Analysis with the approach adopted by PADOG on the genes that are reported as translationally regulated (ie. exhibit a significant change in TE) by the DeltaTE package. It can be used on its own to see the impact of translation regulation on gene sets, but it is also integrated as an additional analysis method within ReactomeGSA, where results are further contextualised in terms of pathways and directionality of the change.
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Keywords {🔍}
package, bioconductor, version, packages, terapadog, analysis, regulation, release, source, translational, efficiency, padog, method, gionmattia, carancini, enter, install, reports, binary, learn, developers, started, software, gene, genes, change, httpsbioconductororgpackagesterapadog, installation, start, documentation, system, details, bioc, stats, url, macos, terapadogtgz, repository, git, clone, code, registration, open, gbcc, joint, galaxybioconductor, conference, search, menu, home,
Topics {✒️}
org/packages/terapadog source repository /gionmattia/terapadog bug reports joint galaxy/bioconductor conference bioconductor release tgz source repository source package org/packages/terapadog release additional analysis method //code gene set analysis bioconductor support site /gionmattia/terapadog/issues script reference manual gz windows binary zip macos binary tgz macos binary gionmattia carancini [cre git clone https details biocviews methods system requirements package performs deltate package package installed package version 1 started install packages translation regulation package padog method //bioconductor bioconductor gene sets registration open approach adopted translationally regulated aut] orcid quietly = true older versions gpl-2 depends developer access org released version devel version transcriptomics version significant change view documentation overlapping genes url download stats
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