BIOCONDUCTOR . ORG {
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Title:
Bioconductor - tadar
Description:
This package provides functions to standardise the analysis of Differential Allelic Representation (DAR). DAR compromises the integrity of Differential Expression analysis results as it can bias expression, influencing the classification of genes (or transcripts) as being differentially expressed. DAR analysis results in an easy-to-interpret value between 0 and 1 for each genetic feature of interest, where 0 represents identical allelic representation and 1 represents complete diversity. This metric can be used to identify features prone to false-positive calls in Differential Expression analysis, and can be leveraged with statistical methods to alleviate the impact of such artefacts on RNA-seq data.
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Keywords {🔍}
package, bioconductor, version, analysis, packages, tadar, differential, allelic, representation, release, dar, source, expression, baer, enter, install, reports, binary, learn, developers, started, software, transcriptome, results, represents, methods, rnaseq, lachlan, aut, orcid, pederson, httpsbioconductororgpackagestadar, installation, start, documentation, system, details, variantannotation, bioc, stats, url, macos, tadartgz, repository, git, clone, code, registration, open, gbcc,
Topics {✒️}
org/packages/tadar source repository /baerlachlan/tadar bug reports joint galaxy/bioconductor conference bioconductor release tgz source repository source package org/packages/tadar differential allelic representation release //code bioconductor support site /baerlachlan/tadar/issues identify features prone false-positive calls rna-seq data script reference manual gz windows binary zip macos binary tgz macos binary lachlan baer [aut differential expression analysis git clone https package installed details biocviews dar analysis results package version 1 variantannotation system requirements started install packages package bias expression cre] orcid //bioconductor bioconductor transcriptome analysis dar analysis variantannotation version registration open dar compromises differentially expressed genetic feature quietly = true older versions pdf news gpl-3 depends developer access org released version devel version statistical methods
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