BIOCONDUCTOR . ORG {
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Title:
Bioconductor - srnadiff
Description:
srnadiff is a package that finds differently expressed regions from RNA-seq data at base-resolution level without relying on existing annotation. To do so, the package implements the identify-then-annotate methodology that builds on the idea of combining two pipelines approachs differential expressed regions detection and differential expression quantification. It reads BAM files as input, and outputs a list differentially regions, together with the adjusted p-values.
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Keywords {🔍}
package, bioconductor, srnadiff, packages, version, regions, expressed, release, source, differentially, zytnicki, enter, install, binary, learn, developers, started, software, finding, rnaseq, data, differential, matthias, aut, installation, start, documentation, system, details, bioc, stats, url, macos, srnadifftgz, repository, git, clone, reports, code, registration, open, gbcc, joint, galaxybioconductor, conference, search, menu, home, released, devel,
Topics {✒️}
org/packages/srnadiff source repository base-resolution level joint galaxy/bioconductor conference bioconductor release tgz source repository list differentially regions source package rna-seq data differential expression quantification release //code bioconductor support site reads bam files adjusted p-values script reference manual gz windows binary zip macos binary tgz macos binary srnadiff package zytnicki matthias [aut git clone https details biocviews biocstyle system requirements package implements package installed packages started install package bioconductor //bioconductor org registration open existing annotation annotate methodology quietly = true older versions pdf news gpl-3 depends developer access released version devel version statisticalmethod version view documentation ++11 url download stats install enter citation //git installation srnadiff
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