BIOCONDUCTOR . ORG {
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Title:
Bioconductor - scmap
Description:
Single-cell RNA-seq (scRNA-seq) is widely used to investigate the composition of complex tissues since the technology allows researchers to define cell-types using unsupervised clustering of the transcriptome. However, due to differences in experimental methods and computational analyses, it is often challenging to directly compare the cells identified in two different experiments. scmap is a method for projecting cells from a scRNA-seq experiment on to the cell-types or individual cells identified in a different experiment.
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Keywords {🔍}
bioconductor, package, packages, scmap, version, release, source, rnaseq, cells, install, reports, binary, learn, developers, started, software, unsupervised, singlecell, scrnaseq, celltypes, methods, identified, experiment, vladimir, kiselev, installation, start, enter, documentation, system, text, license, details, bioc, stats, url, macos, scmaptgz, repository, git, clone, code, registration, open, gbcc, joint, galaxybioconductor, conference, search, menu,
Topics {✒️}
/hemberg-lab/scmap bug reports org/packages/scmap source repository single-cell rna-seq joint galaxy/bioconductor conference bioconductor release tgz source repository source package `scmap` package vignette release //code define cell-types bioconductor support site script reference manual gz windows binary zip macos binary tgz macos binary package installed scrna-seq experiment git clone https details biocviews individual cells identified package packages started install scrna-seq cell-types cells identified bioconductor //bioconductor projecting cells registration open unsupervised projection complex tissues unsupervised clustering computational analyses directly compare quietly = true older versions pdf news gpl-3 depends developer access released version devel version visualization version org/ org experimental methods view documentation system requirements url
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