BIOCONDUCTOR . ORG {
}
Title:
Bioconductor - regutools
Description:
RegulonDB has collected, harmonized and centralized data from hundreds of experiments for nearly two decades and is considered a point of reference for transcriptional regulation in Escherichia coli K12. Here, we present the regutools R package to facilitate programmatic access to RegulonDB data in computational biology. regutools provides researchers with the possibility of writing reproducible workflows with automated queries to RegulonDB. The regutools package serves as a bridge between RegulonDB data and the Bioconductor ecosystem by reusing the data structures and statistical methods powered by other Bioconductor packages. We demonstrate the integration of regutools with Bioconductor by analyzing transcription factor DNA binding sites and transcriptional regulatory networks from RegulonDB. We anticipate that regutools will serve as a useful building block in our progress to further our understanding of gene regulatory networks.
Website Age:
23 years and 7 months (reg. 2001-11-19).
Matching Content Categories {๐}
- Technology & Computing
- Education
- Careers
Content Management System {๐}
What CMS is bioconductor.org built with?
Custom-built
No common CMS systems were detected on Bioconductor.org, and no known web development framework was identified.
Traffic Estimate {๐}
What is the average monthly size of bioconductor.org audience?
๐ Good Traffic: 50k - 100k visitors per month
Based on our best estimate, this website will receive around 54,716 visitors per month in the current month.
check SE Ranking
check Ahrefs
check Similarweb
check Ubersuggest
check Semrush
How Does Bioconductor.org Make Money? {๐ธ}
We find it hard to spot revenue streams.
Not all websites are made for profit; some exist to inform or educate users. Or any other reason why people make websites. And this might be the case. Bioconductor.org might have a hidden revenue stream, but it's not something we can detect.
Keywords {๐}
package, bioconductor, regutools, regulondb, packages, version, data, orcid, aut, release, source, extraction, access, regulatory, networks, barberenajonas, sotelofonseca, alquicirahernandez, salgado, colladotorres, reyes, enter, install, reports, binary, learn, developers, started, software, reference, transcriptional, programmatic, workflows, methods, transcription, joselyn, chavez, ctb, chรกvez, httpsgithubcomcomunidadbioinforegutools, installation, start, documentation, system, details, bioc, stats, url, macos, regutoolstgz,
Topics {โ๏ธ}
org/packages/regutools source repository /comunidadbioinfo/regutools bug reports /bioinformatics/advance-article-abstract/doi/10 joint galaxy/bioconductor conference bioconductor release tgz source repository source package writing reproducible workflows org/packages/regutools release regutools package serves joselyn chavez [aut //code bioconductor packages sotelo-fonseca je escherichia coli k12 gene regulatory networks bacterial regulatory networks gz windows binary zip macos binary tgz macos binary bioconductor support site transcriptional regulatory networks statistical methods powered script reference manual details biocviews biocfilecache system requirements git clone https facilitate programmatic access package installed package version 1 started install cre] orcid bioconductor ecosystem barberena-jonas alquicira-hernandez collado-torres packages /comunidadbioinfo/regutools package ๏ฟฝprogrammatic access transcriptional regulation 1093/bioinformatics/btaa575 1093/bioinformatics/btaa575/5861528 developer access bioconductor //bioconductor registration open data extraction centralized data
Questions {โ}
- Need some help?
Social Networks {๐}(2)
External Links {๐}(22)
- What's the monthly income of https://doi.org/doi:10.18129/B9.bioc.regutools?
- What is the earnings of https://orcid.org/0000-0002-4974-4591?
- How much revenue does https://orcid.org/0000-0001-7413-638X generate?
- What is the earnings of https://orcid.org/0000-0003-1600-2396?
- How much profit is https://orcid.org/0000-0002-9049-7780 making per month?
- How much does https://orcid.org/0000-0002-3166-5801 net monthly?
- What's the income generated by https://orcid.org/0000-0003-2140-308X each month?
- What's the income of https://orcid.org/0000-0001-8717-6612?
- What's the monthly income of https://doi.org/10.18129/B9.bioc.regutools?
- Get to know https://doi.org/10.1093/bioinformatics/btaa575's earnings
- Financial intake of https://academic.oup.com/bioinformatics/advance-article-abstract/doi/10.1093/bioinformatics/btaa575/5861528
- http://cran.rstudio.com/web/packages/DBI/index.html's revenue stream
- Earnings of http://cran.rstudio.com/web/packages/RSQLite/index.html
- What is the monthly revenue of https://github.com/ComunidadBioInfo/regutools?
- What's the financial outcome of http://cran.rstudio.com/web/packages/knitr/index.html?
- What are the earnings of http://cran.rstudio.com/web/packages/RefManageR/index.html?
- Financial intake of http://cran.rstudio.com/web/packages/rmarkdown/index.html
- How much does http://cran.rstudio.com/web/packages/sessioninfo/index.html earn?
- What's the income generated by http://cran.rstudio.com/web/packages/testthat/index.html each month?
- How much income does http://cran.rstudio.com/web/packages/covr/index.html have?
- Learn about the earnings of https://bsky.app/profile/bioconductor.bsky.social
- How much money does https://genomic.social/@bioconductor generate?
Analytics and Tracking {๐}
- Google Analytics
- Google Analytics 4
- Google Tag Manager
Libraries {๐}
- jQuery
Emails and Hosting {โ๏ธ}
Mail Servers:
- mx1.forwardemail.net
- mx2.forwardemail.net
Name Servers:
- ns-1459.awsdns-54.org
- ns-1784.awsdns-31.co.uk
- ns-876.awsdns-45.net
- ns-91.awsdns-11.com
CDN Services {๐ฆ}
- Cloudflare