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BIOCONDUCTOR . ORG {}

  1. Analyzed Page
  2. Matching Content Categories
  3. CMS
  4. Monthly Traffic Estimate
  5. How Does Bioconductor.org Make Money
  6. Keywords
  7. Topics
  8. Questions
  9. Social Networks
  10. External Links
  11. Analytics And Tracking
  12. Libraries
  13. Hosting Providers
  14. CDN Services

We are analyzing https://www.bioconductor.org/packages/release/bioc/html/pairkat.html.

Title:
Bioconductor - pairkat
Description:
PaIRKAT is model framework for assessing statistical relationships between networks of metabolites (pathways) and an outcome of interest (phenotype). PaIRKAT queries the KEGG database to determine interactions between metabolites from which network connectivity is constructed. This model framework improves testing power on high dimensional data by including graph topography in the kernel machine regression setting. Studies on high dimensional data can struggle to include the complex relationships between variables. The semi-parametric kernel machine regression model is a powerful tool for capturing these types of relationships. They provide a framework for testing for relationships between outcomes of interest and high dimensional data such as metabolomic, genomic, or proteomic pathways. PaIRKAT uses known biological connections between high dimensional variables by representing them as edges of ‘graphs’ or ‘networks.’ It is common for nodes (e.g. metabolites) to be disconnected from all others within the graph, which leads to meaningful decreases in testing power whether or not the graph information is included. We include a graph regularization or ‘smoothing’ approach for managing this issue.
Website Age:
23 years and 7 months (reg. 2001-11-19).

Matching Content Categories {📚}

  • Technology & Computing
  • Virtual Reality
  • Education

Content Management System {📝}

What CMS is bioconductor.org built with?

Custom-built

No common CMS systems were detected on Bioconductor.org, and no known web development framework was identified.

Traffic Estimate {📈}

What is the average monthly size of bioconductor.org audience?

🚀 Good Traffic: 50k - 100k visitors per month


Based on our best estimate, this website will receive around 53,093 visitors per month in the current month.

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How Does Bioconductor.org Make Money? {💸}

We're unsure if the website is profiting.

Not all websites are made for profit; some exist to inform or educate users. Or any other reason why people make websites. And this might be the case. Bioconductor.org could be secretly minting cash, but we can't detect the process.

Keywords {🔍}

bioconductor, package, pairkat, version, packages, release, relationships, high, dimensional, graph, source, model, framework, metabolites, pathways, testing, data, regression, aut, mcgrath, enter, install, reports, binary, learn, developers, started, software, networks, interest, kegg, network, power, kernel, machine, include, variables, carpenter, severn, max, httpsbioconductororgpackagespairkat, installation, start, documentation, system, details, bioc, stats, url, macos,

Topics {✒️}

org/packages/pairkat source repository joint galaxy/bioconductor conference bioconductor release tgz source repository source package org/packages/pairkat bug reports release //code bioconductor support site script reference manual gz windows binary zip macos binary tgz macos binary high dimensional data /ghoshlab/pairkat/issues package installed package version 1 git clone https including graph topography high dimensional variables max mcgrath [cre details biocviews tibble system requirements assessing statistical relationships charlie carpenter [aut] cameron severn [aut] model framework package started install packages testing power software version aut] maintainer //bioconductor bioconductor pairkat queries registration open determine interactions powerful tool biological connections meaningful decreases graph information graph regularization �smoothing’ approach quietly = true older versions pdf news gpl-3 depends developer access

Questions {❓}

  • Need some help?

Social Networks {👍}(2)

External Links {🔗}(13)

Analytics and Tracking {📊}

  • Google Analytics
  • Google Analytics 4
  • Google Tag Manager

Libraries {📚}

  • jQuery

Emails and Hosting {✉️}

Mail Servers:

  • mx1.forwardemail.net
  • mx2.forwardemail.net

Name Servers:

  • ns-1459.awsdns-54.org
  • ns-1784.awsdns-31.co.uk
  • ns-876.awsdns-45.net
  • ns-91.awsdns-11.com

CDN Services {📦}

  • Cloudflare

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