
BIOCONDUCTOR . ORG {
}
Title:
Bioconductor - oppar
Description:
The R implementation of mCOPA package published by Wang et al. (2012). Oppar provides methods for Cancer Outlier profile Analysis. Although initially developed to detect outlier genes in cancer studies, methods presented in oppar can be used for outlier profile analysis in general. In addition, tools are provided for gene set enrichment and pathway analysis.
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Keywords {🔍}
bioconductor, package, packages, oppar, version, analysis, aut, source, outlier, profile, release, pathway, wang, methods, cancer, enter, install, bioc, binary, learn, developers, started, software, mcopa, taciroglu, maetschke, nelson, ragan, davis, soroor, hediyeh, zadeh, installation, start, documentation, system, details, url, macos, oppartgz, repository, git, clone, reports, code, registration, open, gbcc, joint, galaxybioconductor,
Topics {✒️}
org/packages/oppar source repository joint galaxy/bioconductor conference gov/pmc/articles/pmc3553066/ bioconductor release tgz source repository source package source packages mcopa package published release //code bioconductor support site gene set enrichment cancer expression data script reference manual gz windows binary zip macos binary tgz macos binary detect outlier genes package installed git clone https mark ragan [aut] melissa davis [aut] details biocviews gsva system requirements outlier profile analysis alperen taciroglu [aut] source archive chenwei wang [aut] package started install packages outlier profile cancer studies bioconductor //bioconductor maetschke [aut] nelson [aut] ragan ma davis mj pathway analysis org registration open initially developed maetschke sr nelson cc heterogeneous features clinical bioinformatics quietly = true older versions pdf news
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