BIOCONDUCTOR . ORG {
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Title:
Bioconductor - lipidr
Description:
lipidr an easy-to-use R package implementing a complete workflow for downstream analysis of targeted and untargeted lipidomics data. lipidomics results can be imported into lipidr as a numerical matrix or a Skyline export, allowing integration into current analysis frameworks. Data mining of lipidomics datasets is enabled through integration with Metabolomics Workbench API. lipidr allows data inspection, normalization, univariate and multivariate analysis, displaying informative visualizations. lipidr also implements a novel Lipid Set Enrichment Analysis (LSEA), harnessing molecular information such as lipid class, total chain length and unsaturation.
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23 years and 7 months (reg. 2001-11-19).
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Keywords {🔍}
package, bioconductor, lipidr, packages, version, analysis, lipidomics, source, data, mohamed, release, mining, datasets, ahmed, enter, install, license, bioc, reports, binary, learn, developers, started, software, integration, normalization, lipid, aut, molendijk, httpsbioconductororgpackageslipidr, installation, start, documentation, system, text, details, stats, url, macos, lipidrtgz, repository, git, clone, code, registration, open, gbcc, joint, galaxybioconductor, conference,
Topics {✒️}
org/packages/lipidr source repository /ahmohamed/lipidr bug reports joint galaxy/bioconductor conference bioconductor release tgz source repository org/packages/lipidr source package source packages release //code ahmed mohamed [aut] bioconductor support site /ahmohamed/lipidr/issues/ metabolomics workbench api displaying informative visualizations harnessing molecular information total chain length script reference manual gz windows binary zip macos binary tgz macos binary current analysis frameworks package implementing package installed git clone https details biocviews magrittr system requirements package version 2 source archive untargeted lipidomics data started install package packages lipid class //bioconductor bioconductor lipidomics datasets downstream analysis lipidomics results multivariate analysis registration open data mining complete workflow numerical matrix skyline export data inspection quietly = true older versions pdf news summarizedexperiment imports
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