BIOCONDUCTOR . ORG {
}
Title:
Bioconductor - lineagespot
Description:
Lineagespot is a framework written in R, and aims to identify SARS-CoV-2 related mutations based on a single (or a list) of variant(s) file(s) (i.e., variant calling format). The method can facilitate the detection of SARS-CoV-2 lineages in wastewater samples using next generation sequencing, and attempts to infer the potential distribution of the SARS-CoV-2 lineages.
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23 years and 7 months (reg. 2001-11-19).
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Keywords {๐}
aut, bioconductor, package, packages, lineagespot, version, sarscov, lineages, release, reports, source, wastewater, sequencing, nikolaos, pechlivanis, maria, enter, install, license, binary, learn, developers, started, software, detection, samples, tsagiopoulou, maniou, togkousidis, mouchtaropoulou, chassalevris, chaintoutis, dovas, petala, kostoglou, karapantsios, laidou, vlachonikola, orfanou, fragkouli, keisaris, chatzidimitriou, papadopoulos, papaioannou, argiriou, psomopoulos, installation, start, documentation, system,
Topics {โ๏ธ}
org/packages/lineagespot source repository /biodataanalysisgroup/lineagespot bug reports joint galaxy/bioconductor conference bioconductor release ๏ฟฝdetecting sars-cov-2 lineages tgz source repository source package styliani-christina fragkouli [aut] sars-cov-2 lineages ๏ฟฝ scientific reports release //code bioconductor support site /biodataanalysisgroup/lineagespot/issues lineagespot user guide script reference manual gz windows binary zip macos binary tgz macos binary package installed nikolaos pechlivanis [aut maria tsagiopoulou [aut] maria petala [aut] anastasis togkousidis [aut] evangelia mouchtaropoulou [aut] taxiarchis chassalevris [aut] serafeim chaintoutis [aut] chrysostomos dovas [aut] margaritis kostoglou [aut] thodoris karapantsios [aut] stamatia laidou [aut] elisavet vlachonikola [aut] aspasia orfanou [aut] sofoklis keisaris [aut] anastasia chatzidimitriou [aut] agis papadopoulos [aut] nikolaos papaioannou [aut] anagnostis argiriou [aut] git clone https variant calling format details biocviews utils system requirements package packages started install bioconductor //bioconductor generation sequencing registration open wastewater samples
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