BIOCONDUCTOR . ORG {
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Title:
Bioconductor - eudysbiome
Description:
eudysbiome a package that permits to annotate the differential genera as harmful/harmless based on their ability to contribute to host diseases (as indicated in literature) or unknown based on their ambiguous genus classification. Further, the package statistically measures the eubiotic (harmless genera increase or harmful genera decrease) or dysbiotic(harmless genera decrease or harmful genera increase) impact of a given treatment or environmental change on the (gut-intestinal, GI) microbiome in comparison to the microbiome of the reference condition.
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Keywords {🔍}
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Topics {✒️}
org/packages/eudysbiome source repository joint galaxy/bioconductor conference bioconductor release tgz source repository source package org/packages/eudysbiome package statistically measures 16s microbial data release //code bioconductor support site ambiguous genus classification gz windows binary zip macos binary tgz macos binary harmless genera increase harmful genera decrease harmless genera decrease harmful genera increase eudysbiome user manual harmful/harmless based script reference manual git clone https details biocviews biostrings system requirements package installed package version 1 started install packages package software version differential genera //bioconductor bioconductor unknown based reference condition xiaoyuan zhou registration open cartesian plot contingency test host diseases environmental change gut-intestinal quietly = true older versions gpl-2 depends developer access org download stats released version
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