BIOCONDUCTOR . ORG {
}
Title:
Bioconductor - cytoviewer
Description:
This R package supports interactive visualization of multi-channel images and segmentation masks generated by imaging mass cytometry and other highly multiplexed imaging techniques using shiny. The cytoviewer interface is divided into image-level (Composite and Channels) and cell-level visualization (Masks). It allows users to overlay individual images with segmentation masks, integrates well with SingleCellExperiment and SpatialExperiment objects for metadata visualization and supports image downloads.
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23 years and 7 months (reg. 2001-11-19).
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Keywords {🔍}
package, bioconductor, packages, cytoviewer, version, visualization, interactive, multichannel, release, source, image, images, masks, imaging, meyer, enter, install, reports, binary, learn, developers, started, software, supports, segmentation, highly, multiplexed, shiny, singlecellexperiment, downloads, lasse, aut, orcid, eling, installation, start, documentation, system, details, bioc, url, macos, cytoviewertgz, repository, git, clone, code, registration, open, gbcc,
Topics {✒️}
org/packages/cytoviewer source repository /bodenmillergroup/cytoviewer bug reports joint galaxy/bioconductor conference bioconductor release multi-channel images tgz source repository source package overlay individual images supports image downloads /bioconductor package release //code imaging mass cytometry bioconductor support site /bodenmillergroup/cytoviewer/issues script reference manual gz windows binary zip macos binary tgz macos binary cell-level visualization lasse meyer [aut package installed git clone https details biocviews summarizedexperiment system requirements segmentation masks generated interactive visualization packages started install image-level package metadata visualization cytoviewer interface cre] orcid bioconductor //bioconductor segmentation masks registration open spatialexperiment objects � bmc bioinformatics quietly = true older versions pdf news gpl-3 depends developer access download stats released version devel version twochannel version org/10
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