
BIOCONDUCTOR . ORG {
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Title:
Bioconductor - cfdnakit
Description:
This package provides basic functions for analyzing shallow whole-genome sequencing (~0.3X or more) of cell-free DNA (cfDNA). The package basically extracts the length of cfDNA fragments and aids the vistualization of fragment-length information. The package also extract fragment-length information per non-overlapping fixed-sized bins and used it for calculating ctDNA estimation score (CES).
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Keywords {🔍}
package, bioconductor, packages, version, cfdnakit, source, sequencing, cfdna, release, cellfree, dna, pitithat, puranachot, enter, install, bioc, reports, binary, learn, developers, started, software, fragmenlength, analysis, highthroughput, wholegenome, fragmentlength, information, httpsbioconductororgpackagescfdnakit, installation, start, documentation, system, details, stats, url, macos, cfdnakittgz, repository, git, clone, code, registration, open, gbcc, joint, galaxybioconductor, conference, search, menu,
Topics {✒️}
org/packages/cfdnakit source repository joint galaxy/bioconductor conference fragmen-length analysis package overlapping fixed-sized bins bioconductor release extract fragment-length information /pitithat-pu/cfdnakit/issues org/packages/cfdnakit tgz source repository bug reports source packages package basically extracts source package release fragment-length information //code bioconductor support site cell-free dna script reference manual gz windows binary zip macos binary tgz macos binary pitithat puranachot [aut high-throughput sequencing git clone https details biocviews rlang system requirements source archive package installed package version 1 started install packages package cfdnakit vignette //bioconductor bioconductor genome sequencing registration open basic functions analyzing shallow cre] orcid quietly = true older versions pdf news gpl-3 depends developer access org released version devel version wholegenome version
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