BIOCONDUCTOR . ORG {
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Title:
Bioconductor - casper
Description:
Infer alternative splicing from paired-end RNA-seq data. The model is based on counting paths across exons, rather than pairwise exon connections, and estimates the fragment size and start distributions non-parametrically, which improves estimation precision.
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Keywords {π}
bioconductor, package, packages, version, casper, release, source, alternative, splicing, pairedend, rnaseq, start, enter, install, pdf, binary, learn, developers, started, software, based, data, david, rossell, installation, documentation, system, manual, details, bioc, url, macos, repository, git, clone, reports, code, registration, open, gbcc, joint, galaxybioconductor, conference, search, menu, home, released, devel, characterization, reads,
Topics {βοΈ}
paired-end rna-seq data org/packages/casper source repository joint galaxy/bioconductor conference bioconductor release source package source repository release //code bioconductor support site infer alternative splicing pairwise exon connections improves estimation precision camille stephan-otto οΏ½quantifying alternative splicing package installed gz windows binary script reference manual git clone https zip macos binary alternative splicing based details biocviews vgam system requirements package packages started install macos binary casper library david rossell bioconductor //bioconductor org registration open counting paths fragment size manuel kroiss miranda stobbe applied statistics quietly = true older versions genomicranges imports developer access download stats released version devel version transcription version pdf manual view documentation url install start distributions
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