We are analyzing https://link.springer.com/article/10.1186/s13100-015-0041-9.

Title:
Repbase Update, a database of repetitive elements in eukaryotic genomes | Mobile DNA
Description:
Repbase Update (RU) is a database of representative repeat sequences in eukaryotic genomes. Since its first development as a database of human repetitive sequences in 1992, RU has been serving as a well-curated reference database fundamental for almost all eukaryotic genome sequence analyses. Here, we introduce recent updates of RU, focusing on technical issues concerning the submission and updating of Repbase entries and will give short examples of using RU data. RU sincerely invites a broader submission of repeat sequences from the research community.
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28 years and 1 months (reg. 1997-05-29).

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Keywords {🔍}

sequences, pubmed, article, sequence, google, scholar, consensus, repbase, dna, central, database, tes, cas, genome, classification, entries, eukaryotic, genomes, jurka, data, repeat, families, family, update, submission, research, elements, transposons, superfamily, information, open, transposable, species, retrotransposons, repetitive, access, tools, identification, search, number, kojima, updating, giri, repbasesubmitter, subfamilies, submitted, res, evol, repeats, users,

Topics {✒️}

multi-copied rna genes select top-hit sequences org/repbase/update/search org/repbase/update/browse org/repbase/update/index homology-based search tools org/downloads/software/repbasesubmitter/ open access license org/server/repbase/index comprise high-quality proteins transposable element diversification article download pdf majority-rule consensus sequence kapitonov vv accompanying annotation-supportive files human transposable elements dedicated databases privacy choices/manage cookies article bao full-length ltr retrotransposons de novo identification eukaryotic genome research retrotransposon sequences cr1-3_lmi adding protein sequences human repetitive dna �reference” protein library closely related subfamilies long dna transposons related subjects full access article published eukaryotic dna transposons give short examples remotely related species cytogenet genome res target site duplications fasta-formatted ru data repeated horizontal transfer human repetitive sequences recently active families curated repeat library accompanying commentaries published kojima kk genome biol evol 'copyright information' section repetitive dna based european economic area remain permanently archived significantly divergent region correctly ig-formatted

Schema {🗺️}

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         description:Repbase Update (RU) is a database of representative repeat sequences in eukaryotic genomes. Since its first development as a database of human repetitive sequences in 1992, RU has been serving as a well-curated reference database fundamental for almost all eukaryotic genome sequence analyses. Here, we introduce recent updates of RU, focusing on technical issues concerning the submission and updating of Repbase entries and will give short examples of using RU data. RU sincerely invites a broader submission of repeat sequences from the research community.
         datePublished:2015-06-02T00:00:00Z
         dateModified:2015-06-02T00:00:00Z
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            Plant Genetics and Genomics
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            Microbiology
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      headline:Repbase Update, a database of repetitive elements in eukaryotic genomes
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      dateModified:2015-06-02T00:00:00Z
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         Repbase Update
         Repbase Reports
         Transposable element
         RepbaseSubmitter
         Database
         Human Genetics
         Animal Genetics and Genomics
         Plant Genetics and Genomics
         Developmental Biology
         Microbiology
         Microbial Genetics and Genomics
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                     type:PostalAddress
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            address:
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      affiliation:
            name:Genetic Information Research Institute
            address:
               name:Genetic Information Research Institute, Los Altos, USA
               type:PostalAddress
            type:Organization
            name:Graduate School of Frontier Sciences, University of Tokyo
            address:
               name:Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, University of Tokyo, Minato-ku, Japan
               type:PostalAddress
            type:Organization
            name:Institute of Medical Science, University of Tokyo
            address:
               name:Institute of Medical Science, University of Tokyo, Tokyo, Japan
               type:PostalAddress
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      email:[email protected]
      name:Oleksiy Kohany
      affiliation:
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            address:
               name:Genetic Information Research Institute, Los Altos, USA
               type:PostalAddress
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      name:Genetic Information Research Institute, Los Altos, USA
      name:Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, University of Tokyo, Minato-ku, Japan
      name:Institute of Medical Science, University of Tokyo, Tokyo, Japan
      name:Genetic Information Research Institute, Los Altos, USA

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