We are analyzing https://link.springer.com/article/10.1186/gb-2012-13-1-r5.

Title:
Uberon, an integrative multi-species anatomy ontology | Genome Biology
Description:
We present Uberon, an integrated cross-species ontology consisting of over 6,500 classes representing a variety of anatomical entities, organized according to traditional anatomical classification criteria. The ontology represents structures in a species-neutral way and includes extensive associations to existing species-centric anatomical ontologies, allowing integration of model organism and human data. Uberon provides a necessary bridge between anatomical structures in different taxa for cross-species inference. It uses novel methods for representing taxonomic variation, and has proved to be essential for translational phenotype analyses. Uberon is available at http://uberon.org
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28 years and 1 months (reg. 1997-05-29).

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Keywords {🔍}

ontology, uberon, ontologies, classes, pubmed, anatomy, google, scholar, anatomical, class, article, definitions, central, human, axioms, structures, relationships, species, data, multiple, phenotype, partof, mouse, logical, additional, file, existing, development, fma, developmental, lung, figure, owl, information, computable, table, include, provide, structure, reasoning, obo, homology, cas, methods, taxonomic, gene, version, biomedical, applicable, scaos,

Topics {✒️}

func=detail&aid=3291162&group_id=76834&atid=1205376] snomedct /cmungall/uberon/blob/master/mouse_anatomy_xp /cmungall/uberon/blob/master/mouse_anatomy_xp_uberon contract number de-ac02-05ch11231 article number r5 article download pdf org/obo/uberon/releases/2011-09-25/] horridge uk/ims/staff/details construct pair-wise mappings pan-vertebrate vertebral column semantics-free cross-references /documents/5176/version/1/files/npre20105176-1 standalone multi-species ao /cmungall/obo-scripts] tomancak multi-species anatomy ontology composite-vertebrate anatomy file pure text-mining approaches 'extra-embryonic structure' starts bio-specimens involves reference org/owled/2006/acceptedlong/submission_9 multi-species anatomy ontologies multi-species vertebrate ontology adding drosophila-centric terms composite multi-species ontologies multi-species composite ontologies open biomedical ontologies pure text-matching approaches requiring owl-aware tools /arthropod-anatomy-ontology/] courtot org/cgi-bin/detail multi-species bridging extensions powerful cross-species queries generating multi-species ontologies location-specific classes require obo-edit graph viewer ontology-based phenotype annotation taxon-restricted amniote portion full size image pre-generated taxon subsets privacy choices/manage cookies org/obo/uberon/basic mammal-specific brain structures taxon-relevant anatomical entities org/obo/uberon/merged artif intell med pubmed id pax6 activity levels gene ontology project harvest cross-references pac symp biocomput

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Schema {🗺️}

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         headline:Uberon, an integrative multi-species anatomy ontology
         description:We present Uberon, an integrated cross-species ontology consisting of over 6,500 classes representing a variety of anatomical entities, organized according to traditional anatomical classification criteria. The ontology represents structures in a species-neutral way and includes extensive associations to existing species-centric anatomical ontologies, allowing integration of model organism and human data. Uberon provides a necessary bridge between anatomical structures in different taxa for cross-species inference. It uses novel methods for representing taxonomic variation, and has proved to be essential for translational phenotype analyses. Uberon is available at http://uberon.org
         datePublished:2012-01-31T00:00:00Z
         dateModified:2012-01-31T00:00:00Z
         pageStart:1
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            Human Phenotype Ontology
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            Microbial Genetics and Genomics
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      headline:Uberon, an integrative multi-species anatomy ontology
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         Gene Ontology
         Open Biomedical Ontology
         Human Phenotype Ontology
         Logical Definition
         Anatomy Ontology
         Animal Genetics and Genomics
         Human Genetics
         Plant Genetics and Genomics
         Microbial Genetics and Genomics
         Bioinformatics
         Evolutionary Biology
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         type:PostalAddress
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      email:[email protected]
      name:Carlo Torniai
      affiliation:
            name:Library and Department of Medical Informatics and Clinical Epidemiology Oregon Health and Science University
            address:
               name:Library and Department of Medical Informatics and Clinical Epidemiology Oregon Health and Science University, Portland, USA
               type:PostalAddress
            type:Organization
      name:Georgios V Gkoutos
      affiliation:
            name:University of Cambridge
            address:
               name:Department of Genetics, University of Cambridge, Cambridge, UK
               type:PostalAddress
            type:Organization
      name:Suzanna E Lewis
      affiliation:
            name:Lawrence Berkeley National Laboratory
            address:
               name:Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, USA
               type:PostalAddress
            type:Organization
      name:Melissa A Haendel
      affiliation:
            name:Library and Department of Medical Informatics and Clinical Epidemiology Oregon Health and Science University
            address:
               name:Library and Department of Medical Informatics and Clinical Epidemiology Oregon Health and Science University, Portland, USA
               type:PostalAddress
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PostalAddress:
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      name:Library and Department of Medical Informatics and Clinical Epidemiology Oregon Health and Science University, Portland, USA
      name:Department of Genetics, University of Cambridge, Cambridge, UK
      name:Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, USA
      name:Library and Department of Medical Informatics and Clinical Epidemiology Oregon Health and Science University, Portland, USA

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