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Title:
BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data | Genome Biology
Description:
The microarray technique requires the organization and analysis of vast amounts of data. These data include information about the samples hybridized, the hybridization images and their extracted data matrices, and information about the physical array, the features and reporter molecules. We present a web-based customizable bioinformatics solution called BioArray Software Environment (BASE) for the management and analysis of all areas of microarray experimentation. All software necessary to run a local server is freely available.
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Keywords {🔍}
data, analysis, pubmed, article, microarray, google, scholar, information, software, cas, base, reporter, array, expression, annotations, database, gene, hybridization, figure, microarrays, system, lims, user, plugin, modules, image, number, saal, biological, features, run, sample, biomaterial, production, experiment, cancer, central, management, bioinformatics, databases, arrays, integrated, users, types, formats, normalization, cdna, nat, res, meltzer,
Topics {✒️}
extract quantification matrices carl troein & johan vallon-christersson bioarray software environment pax3-fkhr fusion oncogene article number software0003 uk/microarray/arrayexpress/arrayexpress gnu/linux operating system genome-wide expression patterns tab-delimited text files feature-analysis software packages tab-delimited data output org/workgroups/mage/mage unique data-set object myogenic transcription program microarray laboratory locally weighted regression full size image robust informatics system sofia gruvberger privacy choices/manage cookies administrated access levels interactive scatterplot displaying separate software systems genome-wide analysis cpg island microarrays johan vallon-christersson additional software required solaris operating system array production lims related subjects quantification matrices complementary dna microarray unified systems capable determine band size saving results back comparative genomic hybridization array lims feature analyzing microarray information linking microarray resources open-source platform analyzing microarray data public databases ch1 background corrected protein microarrays group array data array data objects gene expression patterns cdna microarray data biological research print map file
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headline:BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data
description:The microarray technique requires the organization and analysis of vast amounts of data. These data include information about the samples hybridized, the hybridization images and their extracted data matrices, and information about the physical array, the features and reporter molecules. We present a web-based customizable bioinformatics solution called BioArray Software Environment (BASE) for the management and analysis of all areas of microarray experimentation. All software necessary to run a local server is freely available.
datePublished:2002-07-15T00:00:00Z
dateModified:2002-07-15T00:00:00Z
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Laboratory Information Management System
Reporter Molecule
Quantification Matrice
Label Extract
Animal Genetics and Genomics
Human Genetics
Plant Genetics and Genomics
Microbial Genetics and Genomics
Bioinformatics
Evolutionary Biology
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headline:BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data
description:The microarray technique requires the organization and analysis of vast amounts of data. These data include information about the samples hybridized, the hybridization images and their extracted data matrices, and information about the physical array, the features and reporter molecules. We present a web-based customizable bioinformatics solution called BioArray Software Environment (BASE) for the management and analysis of all areas of microarray experimentation. All software necessary to run a local server is freely available.
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Laboratory Information Management System
Reporter Molecule
Quantification Matrice
Label Extract
Animal Genetics and Genomics
Human Genetics
Plant Genetics and Genomics
Microbial Genetics and Genomics
Bioinformatics
Evolutionary Biology
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