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Title:
Relationship Between Low Expressions of tRNA-Derived Fragments with Metastatic Behavior of Colorectal Cancer | Journal of Gastrointestinal Cancer
Description:
Purpose Colorectal cancer (CRC) is one of the most commonly diagnosed malignant tumors and highly heterogeneous diseases. More recently, RNA expression profiles have been used as prognostic cancer markers. In this regard, the expression of small non-coding RNAs like tRNA-derived fragments (tRFs) in tumor tissue has potential diagnostic values in metastatic cancer. Method Sixty postoperative CRC tissue samples, consisting of 30 cancers and 30 adjacent normal tissues, were collected from cancer patients. We evaluated MINTbase database to select tRNA-derived fragments. The expression levels of miR-1280, miR1308, tRNA-ValAAC/CAC, and tRNA-AspGTC were measured by TaqMan quantitative reverse transcription PCR technology. Also, we have evaluated the correlation between the levels of tRFs gene expression and clinicopathological of CRC disease. Result The three tRFs derived from tRF/miR-1280, tRNA-ValAAC/CAC, and tRNA-AspGTC downregulated in tumor tissues (all, pโ<โ0.0001). These tRFs have lower expression in stage IV in comparison with stage III. The tRFs derived from tRNA-ValAAC (pโ=โ0.005) and tRNA-AspGTC (pโ=โ0.034) showed the decreased expression in CRC patients with distant metastasis. Conclusion The present study demonstrated that low expression of tRF/miR-1280, tRNA-ValAAC/CAC, and tRNA-AspGTC was significantly associated with metastatic stage and more aggressive tumor behavior of CRC disease. Our finding promising the potential of using tRFs as biomarkers for cancer diagnosis.
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month download article/chapter real-time quantitative pcr mirna-mrna regulatory pairs microrna-1280/jag2 network comprises trna-derived small rnas mt-trf-tyr-gta-001 increased 5โฒ-trf-lysctt results select trna-derived fragments oncopathology research center low-risk myeloma suggesting full article pdf privacy choices/manage cookies related subjects potential diagnostic values specific exosomal microrna rna expression profiles inflammatory breast cancer trna-derived fragments trnaโderived fragments breast tumor aggressiveness aberrantly expressed mirnas mirna expression profiling transfer rna detection microrna expression profiling gastrointestinal cancer aims eukaryotic gene expression disease early progression 5โmirna signature predictive jafar kiani trna-valaac/cac european economic area highly heterogeneous diseases genomic โdark matter nucleic acids res ajcc 8th edition dna microarray technique adv cancer res papillary thyroid cancer cancer manag res conditions privacy policy trna-aspgtc downregulated clin lab anal high-risk medulloblastoma aggressive tumor behavior ann surg oncol north khorasan university shahid beheshti university promising valuable approach comprehensive expression profile article sahlolbei
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headline:Relationship Between Low Expressions of tRNA-Derived Fragments with Metastatic Behavior of Colorectal Cancer
description:Colorectal cancer (CRC) is one of the most commonly diagnosed malignant tumors and highly heterogeneous diseases. More recently, RNA expression profiles have been used as prognostic cancer markers. In this regard, the expression of small non-coding RNAs like tRNA-derived fragments (tRFs) in tumor tissue has potential diagnostic values in metastatic cancer. Sixty postoperative CRC tissue samples, consisting of 30 cancers and 30 adjacent normal tissues, were collected from cancer patients. We evaluated MINTbase database to select tRNA-derived fragments. The expression levels of miR-1280, miR1308, tRNA-ValAAC/CAC, and tRNA-AspGTC were measured by TaqMan quantitative reverse transcription PCR technology. Also, we have evaluated the correlation between the levels of tRFs gene expression and clinicopathological of CRC disease. The three tRFs derived from tRF/miR-1280, tRNA-ValAAC/CAC, and tRNA-AspGTC downregulated in tumor tissues (all, pโ<โ0.0001). These tRFs have lower expression in stage IV in comparison with stage III. The tRFs derived from tRNA-ValAAC (pโ=โ0.005) and tRNA-AspGTC (pโ=โ0.034) showed the decreased expression in CRC patients with distant metastasis. The present study demonstrated that low expression of tRF/miR-1280, tRNA-ValAAC/CAC, and tRNA-AspGTC was significantly associated with metastatic stage and more aggressive tumor behavior of CRC disease. Our finding promising the potential of using tRFs as biomarkers for cancer diagnosis.
datePublished:2021-11-26T00:00:00Z
dateModified:2021-11-26T00:00:00Z
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Colorectal cancer (CRC)
tRNA-derived fragments (tRFs)
Biomarker
Metastatic stage
Oncology
Gastroenterology
Radiotherapy
Cancer Research
Internal Medicine
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headline:Relationship Between Low Expressions of tRNA-Derived Fragments with Metastatic Behavior of Colorectal Cancer
description:Colorectal cancer (CRC) is one of the most commonly diagnosed malignant tumors and highly heterogeneous diseases. More recently, RNA expression profiles have been used as prognostic cancer markers. In this regard, the expression of small non-coding RNAs like tRNA-derived fragments (tRFs) in tumor tissue has potential diagnostic values in metastatic cancer. Sixty postoperative CRC tissue samples, consisting of 30 cancers and 30 adjacent normal tissues, were collected from cancer patients. We evaluated MINTbase database to select tRNA-derived fragments. The expression levels of miR-1280, miR1308, tRNA-ValAAC/CAC, and tRNA-AspGTC were measured by TaqMan quantitative reverse transcription PCR technology. Also, we have evaluated the correlation between the levels of tRFs gene expression and clinicopathological of CRC disease. The three tRFs derived from tRF/miR-1280, tRNA-ValAAC/CAC, and tRNA-AspGTC downregulated in tumor tissues (all, pโ<โ0.0001). These tRFs have lower expression in stage IV in comparison with stage III. The tRFs derived from tRNA-ValAAC (pโ=โ0.005) and tRNA-AspGTC (pโ=โ0.034) showed the decreased expression in CRC patients with distant metastasis. The present study demonstrated that low expression of tRF/miR-1280, tRNA-ValAAC/CAC, and tRNA-AspGTC was significantly associated with metastatic stage and more aggressive tumor behavior of CRC disease. Our finding promising the potential of using tRFs as biomarkers for cancer diagnosis.
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dateModified:2021-11-26T00:00:00Z
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Colorectal cancer (CRC)
tRNA-derived fragments (tRFs)
Biomarker
Metastatic stage
Oncology
Gastroenterology
Radiotherapy
Cancer Research
Internal Medicine
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