We are analyzing https://link.springer.com/article/10.1007/s004380050681.

Title:
Processing of plant mitochondrial tRNAGly and tRNASer(GCU) is independent of RNA editing | Molecular Genetics and Genomics
Description:
The genes encoding pea and potato mitochondrial tRNAGly and pea mitochondrial tRNASer(GCU) were analyzed with particular respect to their expression. Secondary-structure models deduced from the identical potato and pea tRNAGly gene sequences revealed A7:C66 mismatches in the seventh base pair at the base of the acceptor stems of both tRNAs. Sequence analyses of tRNAGly cDNA clones showed that these mispairings are not corrected by C66 to U66 conversions, as observed in plant mitochondrial tRNAPhe. Likewise, a U6:C67 mismatch identified in the acceptor stem of the pea tRNASer(GCU) is not altered by RNA editing to a mismatched U:U pair, which is created by RNA editing in Oenothera mitochondrial tRNACys. In vitro processing reactions with the respective tRNAGly and tRNASer(GCU) precursors show that such conversions are not necessary for 5′ and 3′ end maturation of these tRNAs. These results demonstrate that not all C:A (A:C) or U:C (C:U) mismatches in double-stranded regions of tRNAs are altered by RNA editing. An RNA editing event in plant mitochondrial tRNAs is thus not generally indicated by the presence of a mismatch but may depend on additional parameters.
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Keywords {🔍}

article, rna, editing, mitochondrial, trnagly, privacy, cookies, content, processing, plant, trnasergcu, trnas, access, information, publish, search, pea, data, log, journal, research, schock, maréchaldrouard, marchfelder, mismatch, discover, springer, optional, personal, parties, policy, find, track, molecular, general, genetics, mgg, independent, cite, binder, explore, potato, gene, mismatches, base, pair, acceptor, conversions, altered, trnacys,

Topics {✒️}

secondary-structure models deduced rna editing event rna editing sites month download article/chapter plant mitochondrial trnas plant mitochondrial trnagly rna editing plant mitochondrial trnaphe c67 mismatch identified related subjects privacy choices/manage cookies vitro processing reactions potato mitochondrial trnagly oenothera mitochondrial trnacys full article pdf pea mitochondrial trnaser genes encoding pea european economic area scope submit manuscript double-stranded regions check access shaping stress responses albert-einstein-allee 11 upra0406 du crns université louis pasteur f-67084 strasbourg-cedex instant access conditions privacy policy accepting optional cookies journal finder publish article molecular seventh base pair mismatch maréchal-drouard article log information privacy policy personal data respective trnagly additional parameters books a optional cookies pea trnaser article cite manage preferences article schock processing subscription content similar content data protection

Schema {🗺️}

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         headline:Processing of plant mitochondrial tRNAGly and tRNASer(GCU) is independent of RNA editing
         description: The genes encoding pea and potato mitochondrial tRNAGly and pea mitochondrial tRNASer(GCU) were analyzed with particular respect to their expression. Secondary-structure models deduced from the identical potato and pea tRNAGly gene sequences revealed A7:C66 mismatches in the seventh base pair at the base of the acceptor stems of both tRNAs. Sequence analyses of tRNAGly cDNA clones showed that these mispairings are not corrected by C66 to U66 conversions, as observed in plant mitochondrial tRNAPhe. Likewise, a U6:C67 mismatch identified in the acceptor stem of the pea tRNASer(GCU) is not altered by RNA editing to a mismatched U:U pair, which is created by RNA editing in Oenothera mitochondrial tRNACys. In vitro processing reactions with the respective tRNAGly and tRNASer(GCU) precursors show that such conversions are not necessary for 5′ and 3′ end maturation of these tRNAs. These results demonstrate that not all C:A (A:C) or U:C (C:U) mismatches in double-stranded regions of tRNAs are altered by RNA editing. An RNA editing event in plant mitochondrial tRNAs is thus not generally indicated by the presence of a mismatch but may depend on additional parameters.
         datePublished:
         dateModified:
         pageStart:554
         pageEnd:560
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         keywords:
            Key words Plant mitochondria
            Transfer RNAs
            RT-PCR
            RNA editing
            tRNA processing
            Plant Genetics and Genomics
            Human Genetics
            Microbial Genetics and Genomics
            Animal Genetics and Genomics
            Biochemistry
            general
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      headline:Processing of plant mitochondrial tRNAGly and tRNASer(GCU) is independent of RNA editing
      description: The genes encoding pea and potato mitochondrial tRNAGly and pea mitochondrial tRNASer(GCU) were analyzed with particular respect to their expression. Secondary-structure models deduced from the identical potato and pea tRNAGly gene sequences revealed A7:C66 mismatches in the seventh base pair at the base of the acceptor stems of both tRNAs. Sequence analyses of tRNAGly cDNA clones showed that these mispairings are not corrected by C66 to U66 conversions, as observed in plant mitochondrial tRNAPhe. Likewise, a U6:C67 mismatch identified in the acceptor stem of the pea tRNASer(GCU) is not altered by RNA editing to a mismatched U:U pair, which is created by RNA editing in Oenothera mitochondrial tRNACys. In vitro processing reactions with the respective tRNAGly and tRNASer(GCU) precursors show that such conversions are not necessary for 5′ and 3′ end maturation of these tRNAs. These results demonstrate that not all C:A (A:C) or U:C (C:U) mismatches in double-stranded regions of tRNAs are altered by RNA editing. An RNA editing event in plant mitochondrial tRNAs is thus not generally indicated by the presence of a mismatch but may depend on additional parameters.
      datePublished:
      dateModified:
      pageStart:554
      pageEnd:560
      sameAs:https://doi.org/10.1007/s004380050681
      keywords:
         Key words Plant mitochondria
         Transfer RNAs
         RT-PCR
         RNA editing
         tRNA processing
         Plant Genetics and Genomics
         Human Genetics
         Microbial Genetics and Genomics
         Animal Genetics and Genomics
         Biochemistry
         general
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