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Structural features and expression analysis of a linear mitochondrial plasmid in rapeseed (Brassica napus L.) | Molecular Genetics and Genomics
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A linear plasmid molecule about 11 kb in length is present in the mitochondria of some varieties of rapeseed (Brassica napus L.). This plasmid can be inherited from the male parent, through the pollen, as well as by the usual maternal route, although the main mitochondrial genome is maternally inherited in rapeseed. We determined the complete nucleotide sequence of this plasmid DNA and clarified its genetic organization. The length of the linear plasmid is 11,640 bp. At the termini of the plasmid molecule are inverted repeats of 327 bp. The GC content of the plasmid DNA is 30.9%; thus, the plasmid is quite AT-rich compared to the main mitochondrial genome in higher plants. The plasmid has six ORFs, two of which encode a phage-type DNA polymerase and a phage-type RNA polymerase, respectively. RT-PCR analyses revealed that all six ORFs are transcribed, and all four ORFs on the minus strand are probably cotranscribed from a single promoter located in the terminal inverted repeat. We also show here that at least three of the six ORFs are translated into proteins in rapeseed mitochondria, and expressed at relatively high levels in flowers, as shown by Western analysis. These results suggest that this linear DNA molecule is able to replicate as an autonomous replicon and to express the genes it carries in rapeseed mitochondria.
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Keywords {🔍}
article, plasmid, content, analysis, linear, mitochondrial, rapeseed, brassica, napus, access, privacy, cookies, mitochondria, information, publish, research, search, genome, dna, orfs, data, main, log, journal, genomics, expression, handa, itani, sato, molecule, related, open, discover, springer, optional, personal, parties, policy, find, track, molecular, genetics, structural, features, cite, explore, length, inherited, male, pollen,
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month download article/chapter phage-type rna polymerase rt-pcr analyses revealed phage-type dna polymerase main mitochondrial genome article molecular genetics privacy choices/manage cookies related subjects linear mitochondrial plasmid full article pdf key genes related comparative transcriptome analysis european economic area original paper published scope submit manuscript usual maternal route complete nucleotide sequence single promoter located plasmodiophora brassicae nuclear hitsuji-ga-oka linear dna molecule conditions privacy policy terminal inverted repeat linear plasmid molecule accepting optional cookies check access instant access brassica napus main content log journal finder publish male parent article log structural features article cite privacy policy linear plasmid personal data expression analysis article handa books a rapeseed mitochondria plasmid dna optional cookies plasmid molecule manage preferences genomics aims usage analysis data protection western analysis essential cookies
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headline:Structural features and expression analysis of a linear mitochondrial plasmid in rapeseed (Brassica napus L.)
description: A linear plasmid molecule about 11 kb in length is present in the mitochondria of some varieties of rapeseed (Brassica napus L.). This plasmid can be inherited from the male parent, through the pollen, as well as by the usual maternal route, although the main mitochondrial genome is maternally inherited in rapeseed. We determined the complete nucleotide sequence of this plasmid DNA and clarified its genetic organization. The length of the linear plasmid is 11,640 bp. At the termini of the plasmid molecule are inverted repeats of 327 bp. The GC content of the plasmid DNA is 30.9%; thus, the plasmid is quite AT-rich compared to the main mitochondrial genome in higher plants. The plasmid has six ORFs, two of which encode a phage-type DNA polymerase and a phage-type RNA polymerase, respectively. RT-PCR analyses revealed that all six ORFs are transcribed, and all four ORFs on the minus strand are probably cotranscribed from a single promoter located in the terminal inverted repeat. We also show here that at least three of the six ORFs are translated into proteins in rapeseed mitochondria, and expressed at relatively high levels in flowers, as shown by Western analysis. These results suggest that this linear DNA molecule is able to replicate as an autonomous replicon and to express the genes it carries in rapeseed mitochondria.
datePublished:
dateModified:
pageStart:797
pageEnd:805
sameAs:https://doi.org/10.1007/s00438-002-0711-4
keywords:
Linear plasmid Mitochondria Brassica napus L. Paternal transmission Gene expression
Plant Genetics and Genomics
Human Genetics
Microbial Genetics and Genomics
Animal Genetics and Genomics
Biochemistry
general
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headline:Structural features and expression analysis of a linear mitochondrial plasmid in rapeseed (Brassica napus L.)
description: A linear plasmid molecule about 11 kb in length is present in the mitochondria of some varieties of rapeseed (Brassica napus L.). This plasmid can be inherited from the male parent, through the pollen, as well as by the usual maternal route, although the main mitochondrial genome is maternally inherited in rapeseed. We determined the complete nucleotide sequence of this plasmid DNA and clarified its genetic organization. The length of the linear plasmid is 11,640 bp. At the termini of the plasmid molecule are inverted repeats of 327 bp. The GC content of the plasmid DNA is 30.9%; thus, the plasmid is quite AT-rich compared to the main mitochondrial genome in higher plants. The plasmid has six ORFs, two of which encode a phage-type DNA polymerase and a phage-type RNA polymerase, respectively. RT-PCR analyses revealed that all six ORFs are transcribed, and all four ORFs on the minus strand are probably cotranscribed from a single promoter located in the terminal inverted repeat. We also show here that at least three of the six ORFs are translated into proteins in rapeseed mitochondria, and expressed at relatively high levels in flowers, as shown by Western analysis. These results suggest that this linear DNA molecule is able to replicate as an autonomous replicon and to express the genes it carries in rapeseed mitochondria.
datePublished:
dateModified:
pageStart:797
pageEnd:805
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Linear plasmid Mitochondria Brassica napus L. Paternal transmission Gene expression
Plant Genetics and Genomics
Human Genetics
Microbial Genetics and Genomics
Animal Genetics and Genomics
Biochemistry
general
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