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DNA sequences specific for Caucasian G3m(b) and (g) allotypes: allotyping at the genomic level | Immunogenetics
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Assignment of the G3m(g) and (b) correlative amino acid residues was performed at the genomic level by direct sequencing of DNA from nine Caucasian individuals. Two oligonucleotide primers were used for subclass-specific enzymatic amplification of a DNA segment comprising a major portion of the second and third constant region domains (CH2 and CH3) fo the human IgG3 heavy chain gene. Comparison of the sequences of amplified DNA from individuals serologically typed as homozygous for G3m(b) or G3m(g) or as heterozygous, G3m(b,g), revealed differences in the codons for the amino acid residues 291, 296, and 384. Proline, phenylalanine, and serine at these positions corresponded to G3m(b), and leucine, tyrosine, and asparagine to G3m(g). Heterozygotic individuals, typed G3m(b,g), displayed both the G3m(b) and G3m(g) codons at these three positions. The polymorphism at each of these three codons could be identified either as the appearance, or the loss, of recognition sites for the two restriction endonucleases, Nsp BII and Rsa I. This allowed the development of a polymerase chain reaction (PCR)-based assay permitting the distinction of G3m b and G3m g alleles by analyzing the electrophoretical mobility of the DNA fragments generated by digestion of the PCR-products with Nsp BII and Rsa I.
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google, scholar, grubb, human, article, dna, gmg, amino, acid, gmb, allotypes, privacy, cookies, content, genomic, level, balbín, access, genetic, markers, expl, clin, immunogenet, springer, immunoglobulin, oxford, information, publish, search, immunogenetics, sequences, specific, sequencing, chain, protein, van, ito, miyazaki, matsumoto, immunology, author, lund, analysis, data, log, journal, research, caucasian, milagros, anders,
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month download article/chapter subclass-specific enzymatic amplification constant region domains amino acid sequence article balbín dna sequences specific anders grubb polymerase chain reaction genetic markers privacy choices/manage cookies article immunogenetics aims full article pdf subclass specific amplification allele specific probes dna segment comprising dna fragments generated human immunoglobulin genes direct sequencing related subjects human immunoglobulin allotypes area de bioquímica early rheumatoid artritis european economic area check access blackwell scientific publications instant access conditions privacy policy universidad de oviedo proline phenylalanine leucine based assay permitting accepting optional cookies individuals serologically typed monoclonal anti-gm structural studies de lange journal finder publish allotypic marker gm allotypic markers lund university hospital article log oxford university press amplified dna press grubb human immunoglobulins article cite pcr-products privacy policy personal data
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headline:DNA sequences specific for Caucasian G3m(b) and (g) allotypes: allotyping at the genomic level
description:Assignment of the G3m(g) and (b) correlative amino acid residues was performed at the genomic level by direct sequencing of DNA from nine Caucasian individuals. Two oligonucleotide primers were used for subclass-specific enzymatic amplification of a DNA segment comprising a major portion of the second and third constant region domains (CH2 and CH3) fo the human IgG3 heavy chain gene. Comparison of the sequences of amplified DNA from individuals serologically typed as homozygous for G3m(b) or G3m(g) or as heterozygous, G3m(b,g), revealed differences in the codons for the amino acid residues 291, 296, and 384. Proline, phenylalanine, and serine at these positions corresponded to G3m(b), and leucine, tyrosine, and asparagine to G3m(g). Heterozygotic individuals, typed G3m(b,g), displayed both the G3m(b) and G3m(g) codons at these three positions. The polymorphism at each of these three codons could be identified either as the appearance, or the loss, of recognition sites for the two restriction endonucleases, Nsp BII and Rsa I. This allowed the development of a polymerase chain reaction (PCR)-based assay permitting the distinction of G3m
b
and G3m
g
alleles by analyzing the electrophoretical mobility of the DNA fragments generated by digestion of the PCR-products with Nsp BII and Rsa I.
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dateModified:
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Codon
Proline
Amino Acid Residue
Leucine
Phenylalanine
Immunology
Human Genetics
Gene Function
Cell Biology
Allergology
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headline:DNA sequences specific for Caucasian G3m(b) and (g) allotypes: allotyping at the genomic level
description:Assignment of the G3m(g) and (b) correlative amino acid residues was performed at the genomic level by direct sequencing of DNA from nine Caucasian individuals. Two oligonucleotide primers were used for subclass-specific enzymatic amplification of a DNA segment comprising a major portion of the second and third constant region domains (CH2 and CH3) fo the human IgG3 heavy chain gene. Comparison of the sequences of amplified DNA from individuals serologically typed as homozygous for G3m(b) or G3m(g) or as heterozygous, G3m(b,g), revealed differences in the codons for the amino acid residues 291, 296, and 384. Proline, phenylalanine, and serine at these positions corresponded to G3m(b), and leucine, tyrosine, and asparagine to G3m(g). Heterozygotic individuals, typed G3m(b,g), displayed both the G3m(b) and G3m(g) codons at these three positions. The polymorphism at each of these three codons could be identified either as the appearance, or the loss, of recognition sites for the two restriction endonucleases, Nsp BII and Rsa I. This allowed the development of a polymerase chain reaction (PCR)-based assay permitting the distinction of G3m
b
and G3m
g
alleles by analyzing the electrophoretical mobility of the DNA fragments generated by digestion of the PCR-products with Nsp BII and Rsa I.
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dateModified:
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Proline
Amino Acid Residue
Leucine
Phenylalanine
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Human Genetics
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Cell Biology
Allergology
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