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Title:
NMRPipe: A multidimensional spectral processing system based on UNIX pipes | Journal of Biomolecular NMR
Description:
The NMRPipe system is a UNIX software environment of processing, graphics, and analysis tools designed to meet current routine and research-oriented multidimensional processing requirements, and to anticipate and accommodate future demands and developments. The system is based on UNIX pipes, which allow programs running simultaneously to exchange streams of data under user control. In an NMRPipe processing scheme, a stream of spectral data flows through a pipeline of processing programs, each of which performs one component of the overall scheme, such as Fourier transformation or linear prediction. Complete multidimensional processing schemes are constructed as simple UNIX shell scripts. The processing modules themselves maintain and exploit accurate records of data sizes, detection modes, and calibration information in all dimensions, so that schemes can be constructed without the need to explicitly define or anticipate data sizes or storage details of real and imaginary channels during processing. The asynchronous pipeline scheme provides other substantial advantages, including high flexibility, favorable processing speeds, choice of both all-in-memory and disk-bound processing, easy adaptation to different data formats, simpler software development and maintenance, and the ability to distribute processing tasks on multi-CPU computers and computer networks.
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Keywords {π}
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Topics {βοΈ}
fourier transformation maximum entropy linear prediction month download article/chapter spectral data flows privacy choices/manage cookies related subjects unix programmers manual unix software environment biomolecular nmr aims favorable processing speeds disk-bound processing distribute processing tasks multi-cpu computers full article pdf unix programming environment check access hong kong university instant access including high flexibility nmrpipe processing scheme a-chip methodology multidimensional cpu anticipate data sizes european economic area meet current routine accommodate future demands unix pipes exploit accurate records simpler software development free induction decay input/output lp speech signal process clear water bay conditions privacy policy analysis tools designed programs running simultaneously xview programming manual accepting optional cookies november 1995 volumeΒ 6 journal finder publish personal data unix environment biomolecular research asynchronous pipeline scheme data sizes processing programs programming language nmrpipe system data protection
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Data processing
Fourier transformation
Linear prediction
Maximum entropy
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