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Structural Analysis of Protein-RNA Interactions With Mass Spectrometry | SpringerLink
Description:
We present a high-resolution mass spectrometric footprinting approach enabling the identification of amino acids in the protein of interest interacting with cognate RNA. This approach is particularly attractive for studying large nucleoprotein complexes that are less...
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article, google, scholar, cas, pubmed, structural, rna, structure, privacy, cookies, content, analysis, information, publish, research, protocol, protein, search, rnaprotein, interaction, protocols, proteinrna, interactions, mass, kvaratskhelia, grice, access, nature, biol, press, data, log, journal, spectrometry, molecular, biology, basis, complex, usa, springer, function, optional, media, processing, personal, parties, policy, find, track, cite,
Topics {โ๏ธ}
rna-protein interaction protocols rna-protein interaction networks segmentally isotope-labeled rna human cca-adding enzyme beckman research institute protein-rna interactions proteinโrna complexes privacy choices/manage cookies protocol kvaratskhelia bacterial rna polymerase rna polymerase ii nucleic acid samples ohio state university national cancer institute structural analysis exon junction complex journal finder publish usa stuart protocol cite european economic area biologically relevant conditions cross-species conservation escherichia coli rraa y14-magoh core template-independent polymerization novartis medal lecture humana press conditions privacy policy accepting optional cookies x-ray structure main content log retrovirus research usage analysis crc press mass spectrometry check access ethics access 8 angstrom resolution journal publish le grice cognate rna viral rna structural basis affiliations center protein inhibitor protein modification privacy policy personal data rna processing amino acids
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ScholarlyArticle:
headline:Structural Analysis of Protein-RNA Interactions With Mass Spectrometry
pageEnd:219
pageStart:213
image:https://media.springernature.com/w153/springer-static/cover/book/978-1-60327-475-3.jpg
genre:
Springer Protocols
isPartOf:
name:RNA-Protein Interaction Protocols
isbn:
978-1-60327-475-3
978-1-58829-419-7
type:Book
publisher:
name:Humana Press
logo:
url:https://www.springernature.com/app-sn/public/images/logo-springernature.png
type:ImageObject
type:Organization
author:
name:Mamuka Kvaratskhelia
affiliation:
name:The Ohio State University
address:
name:Center for Retrovirus Research and Comprehensive Cancer Center College of Pharmacy, The Ohio State University, Columbus, USA
type:PostalAddress
type:Organization
type:Person
name:Stuart F. J. Le Grice
affiliation:
name:National Cancer Institute at Frederick
address:
name:RT Biochemistry Section, HIV Drug Resistance Program, National Cancer Institute at Frederick, Frederick, USA
type:PostalAddress
type:Organization
type:Person
keywords:Footprinting, mass spectrometry, nucleoprotein complex, protein, RNA, structure
description:We present a high-resolution mass spectrometric footprinting approach enabling the identification of amino acids in the protein of interest interacting with cognate RNA. This approach is particularly attractive for studying large nucleoprotein complexes that are less amenable to crystallographic or nuclear magnetic resonance analysis. Importantly, our methodology allows examination of protein-RNA interactions under biologically relevant conditions using limited amounts of protein and nucleic acid samples.
datePublished:2008
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Book:
name:RNA-Protein Interaction Protocols
isbn:
978-1-60327-475-3
978-1-58829-419-7
Organization:
name:Humana Press
logo:
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type:ImageObject
name:The Ohio State University
address:
name:Center for Retrovirus Research and Comprehensive Cancer Center College of Pharmacy, The Ohio State University, Columbus, USA
type:PostalAddress
name:National Cancer Institute at Frederick
address:
name:RT Biochemistry Section, HIV Drug Resistance Program, National Cancer Institute at Frederick, Frederick, USA
type:PostalAddress
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Person:
name:Mamuka Kvaratskhelia
affiliation:
name:The Ohio State University
address:
name:Center for Retrovirus Research and Comprehensive Cancer Center College of Pharmacy, The Ohio State University, Columbus, USA
type:PostalAddress
type:Organization
name:Stuart F. J. Le Grice
affiliation:
name:National Cancer Institute at Frederick
address:
name:RT Biochemistry Section, HIV Drug Resistance Program, National Cancer Institute at Frederick, Frederick, USA
type:PostalAddress
type:Organization
PostalAddress:
name:Center for Retrovirus Research and Comprehensive Cancer Center College of Pharmacy, The Ohio State University, Columbus, USA
name:RT Biochemistry Section, HIV Drug Resistance Program, National Cancer Institute at Frederick, Frederick, USA
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