JRVANDERDOES . GITHUB . IO {
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Title:
Functional Data Analysis for Multiplexed Cell Images • funkycells
Description:
Compare variables of interest between (potentially large numbers of) spatial interactions and meta-variables. Spatial variables are summarized using K, or other, functions, and projected for use in a modified random forest model. The model allows comparison of functional and non-functional variables to each other and to noise, giving statistical significance to the results. Included are preparation, modeling, and interpreting tools along with example datasets, as described in VanderDoes et al., (2023) <doi:10.1101/2023.07.18.549619>.
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12 years and 3 months (reg. 2013-03-08).
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Keywords {🔍}
funkycells, package, version, functions, website, cran, author, data, analysis, github, stable, install, development, license, jeremy, vanderdoes, jack, hywood, gregory, rice, skip, contents, started, reference, articles, changelog, term, functional, multiplexed, images, cells, organizes, ways, analyze, cell, relationships, based, empirical, approach, achieves, effective, constructions, accounts, issues, overfitting, encourage, feedback, improvements, submitted, repo,
Topics {✒️}
jack hywood gregory rice functional data analysis present showing applications functionality consistently pops jeremy vanderdoes term ${\tt funkycells}$ package organizes ways ${\tt funkycells}$ contents funkycells 1 jrvanderdoes/funkycells data constructions cran version multiplexed images vignette vignette additional vignettes simulated performance change log actively developing regularly update stable additions links view site built stable version development version github repo package website funkycells cran version package website github skip functions+ cells empirical functions accounts issues overfitting encourage feedback improvements submitted introduction documenting installation found install
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