FEDERICOMARINI . GITHUB . IO {
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Title:
Interactive Differential Expression AnaLysis • ideal
Description:
This package provides functions for an Interactive Differential Expression AnaLysis of RNA-sequencing datasets, to extract quickly and effectively information downstream the step of differential expression. A Shiny application encapsulates the whole package. Support for reproducibility of the whole analysis is provided by means of a template report which gets automatically compiled and can be stored/shared.
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12 years and 3 months (reg. 2013-03-08).
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Keywords {🔍}
ideal, version, package, data, install, provided, analysis, shiny, app, dependencies, true, execution, interactive, bioconductor, code, object, rnaseq, accessible, installation, biocmanagerinstallideal, release, packages, run, devel, experimental, expdesign, project, user, experienced, design, additional, latest, follow, github, warning, command, error, software, features, countmatrix, upload, count, matrix, runtime, instance, server, conduct, license, differential, expression,
Topics {✒️}
rna-seq analysis focused hgnc-based gene symbols analyzing rna-seq data 6/resources/library/ideal´ error bug reports/issues/ rna-seq datasets differential expression automated report generation federico marini interactive html reports time reproducible analysis gold standard methods exploratory data analysis interactive companion tool principal components analysis interactive/reactive design bleeding edge version deployment-oriented version differentially expressed genes required demo dataset lazy loading failed tabular text files experienced data analyst defined deseqdataset object shiny server made org/developers/ providing additional insight install_github command error /federicomarini/ideal/issues reproducible analysis regular user contributor code proper analysis exit status gene identifiers release cycle deseqdataset object latest features experienced bioinformaticians shiny server high standard main tool res_obj = res uni-mainz end-users org/index bioconductor version federicomarini/ideal packages listed design formula
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