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We began analyzing https://www.tandfonline.com/doi/abs/10.4161/rna.26214, but it redirected us to https://www.tandfonline.com/doi/abs/10.4161/rna.26214. The analysis below is for the second page.

Title[redir]:
Full article: 4-thiouridine inhibits rRNA synthesis and causes a nucleolar stress response
Description:
High concentrations (> 100 µM) of the ribonucleoside analog 4-thiouridine (4sU) is widely used in methods for RNA analysis like photoactivatable-ribonucleoside-enhanced crosslinking and immunopreci...

Matching Content Categories {📚}

  • Science
  • Education
  • Dating & Relationships

Content Management System {📝}

What CMS is doi.org built with?

Custom-built

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🌠 Phenomenal Traffic: 5M - 10M visitors per month


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Keywords {🔍}

open, window, rrna, rna, processing, cells, citation, google, scholar, pubmed, pmid, web, science, cell, synthesis, labeling, nucleolar, nascent, analysis, production, treatment, inhibition, total, fig, uridine, uos, signals, min, concentrations, inhibits, stress, proliferation, metabolism, sutagging, ribosomal, npm, ets, levels, treated, porthophosphate, control, protein, biol, show, high, experiments, ribosome, analyzed, degradation, gel,

Topics {✒️}

streptavidin-coated magnetic beads [32p]-ortho-phosphate metabolic labeling 4su-biotin-streptavidin-tagged rna google scholar hernandez-verdun photoactivatable-ribonucleoside-enhanced crosslinking additional material disclosure comparable time-dependent increase mdm2-mediated p53 ubiquitination receive personalised research francis group 4su-tagged rna shows twitter page taylor vivo double-labeling workflow cy3-labeled secondary antibody cellular rna-binding proteins 4su-mediated nucleolar stress 32p-labeled nascent rrna long-range secondary structures [32p]-ortho-phosphate pre-ribosomal rna processing gene expression profiling tumor suppressor p53 p53 tumor suppressor short-term 4su exposure rna-binding protein aberrant 28s rrna google scholar hafner google scholar schwanhäusser google scholar rabani google scholar fatica google scholar könig google scholar kurki google scholar boulon google scholar kenzelmann google scholar srivastava google scholar ghoshal google scholar zhao google scholar jack google scholar ljungman remaining primary transcript methods tissue culture aberrant rrna forms limited influence phosphate-buffered saline rna prevents pseudouridylation internal transcribed spacer-2 google scholar burger μmacs washing buffer google scholar windhager dose-dependent translocation

Questions {❓}

  • 22 How can this difference be explained?
  • How can the inhibition of rRNA synthesis by 4sU be explained on the molecular level?

Schema {🗺️}

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            name:4-thiouridine inhibits rRNA synthesis an ....
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      url:https://www.tandfonline.com/doi/full/10.4161/rna.26214
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      articleSection:Research Paper
      name:4-thiouridine inhibits rRNA synthesis and causes a nucleolar stress response
      headline:4-thiouridine inhibits rRNA synthesis and causes a nucleolar stress response
      abstract:High concentrations (> 100 µM) of the ribonucleoside analog 4-thiouridine (4sU) is widely used in methods for RNA analysis like photoactivatable-ribonucleoside-enhanced crosslinking and immunoprecipitation (PAR-CLIP) and nascent messenger (m)RNA labeling (4sU-tagging). Here, we show that 4sU-tagging at low concentrations ≤ 10 µM can be used to measure production and processing of ribosomal (r)RNA. However, elevated concentrations of 4sU (> 50 µM), which are usually used for mRNA labeling experiments, inhibit production and processing of 47S rRNA. The inhibition of rRNA synthesis is accompanied by nucleoplasmic translocation of nucleolar nucleophosmin (NPM1), induction of the tumor suppressor p53, and inhibition of proliferation. We conclude that metabolic labeling of RNA by 4sU triggers a nucleolar stress response, which might influence the interpretation of results. Therefore, functional ribosome biogenesis, nucleolar integrity, and cell cycle should be addressed in 4sU labeling experiments.
      description:High concentrations (> 100 µM) of the ribonucleoside analog 4-thiouridine (4sU) is widely used in methods for RNA analysis like photoactivatable-ribonucleoside-enhanced crosslinking and immunoprecipitation (PAR-CLIP) and nascent messenger (m)RNA labeling (4sU-tagging). Here, we show that 4sU-tagging at low concentrations ≤ 10 µM can be used to measure production and processing of ribosomal (r)RNA. However, elevated concentrations of 4sU (> 50 µM), which are usually used for mRNA labeling experiments, inhibit production and processing of 47S rRNA. The inhibition of rRNA synthesis is accompanied by nucleoplasmic translocation of nucleolar nucleophosmin (NPM1), induction of the tumor suppressor p53, and inhibition of proliferation. We conclude that metabolic labeling of RNA by 4sU triggers a nucleolar stress response, which might influence the interpretation of results. Therefore, functional ribosome biogenesis, nucleolar integrity, and cell cycle should be addressed in 4sU labeling experiments.
      author:
            type:Person
            name:Dirk Eick
            type:Person
            name:Kaspar Burger
            type:Person
            name:Markus Kellner
            type:Person
            name:Caroline C Friedel
            type:Person
            name:Lars Dölken
            type:Person
            name:Michaela Rohrmoser
            type:Person
            name:Bastian Mühl
            type:Person
            name:Lukas Windhager
            type:Person
            name:Anita Gruber-Eber
            type:Person
            name:Dirk Eick
            type:Person
            name:Dirk Eick
      keywords:4-thiouridine, ribosomal RNA, rRNA processing, p53, nucleolar stress, RNA labeling, nucleophosmin
      pageStart:1623
      pageEnd:1630
      datePublished:2013-09-04
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      name:Markus Kellner
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      name:Lars Dölken
      name:Michaela Rohrmoser
      name:Bastian Mühl
      name:Lukas Windhager
      name:Anita Gruber-Eber
      name:Dirk Eick
      name:Dirk Eick
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External Links {🔗}(226)

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