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article, pubmed, subarachnoid, hemorrhage, google, scholar, vasospasm, methylation, aneurysmal, dna, cerebral, cas, patients, internet, central, httpspubmedncbinlmnihgov, cited, analysis, data, research, blood, epigenetics, jun, association, mar, epigenetic, study, review, wang, stroke, cuadradogodia, delayed, ischemia, neurol, human, zhang, risk, type, med, barcelona, catalunya, spain, giraltsteinhauer, ois, epigenomewide, hospital, genomewide, gene, access, clinical,

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genome-wide meta-analysis identifies month download article/chapter elisa cuadrado-godia contributed dna methylation-based variation epigenome-wide meta-analysis inhibiting p53-induced ferroptosis transcriptome-wide association studies epigenome-wide association study nhgri-ebi gwas catalog mitogen-activated protein kinases myeloid-derived suppressor cells dna methylation data dna methylation differences long-term vascular events marc viles-garcía dna methylation arrays article fernández-pérez stem cell res differential dna methylation angel ois alberto pérez-giraldo genome-wide level full article pdf post-subarachnoid hemorrhage vasospasm cell mixture distribution neural growth factor cuadrado-godia contiguous gene deletion privacy choices/manage cookies epigenetics communications [internet] endothelial nitric oxide early-onset alzheimer disease gene data mining van zwet ew research institute hospital del mar related subjects dna methylation clinical prediction tools ischemic stroke risk blood samples collected newborn blood spots distinctive epigenetic signature biological processes related cross-reactive probes cerebral vasospasm-literature review early brain injury independent risk factor surrogate variable analysis adrià macias-gómez

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• Subarachnoid hemorrhage: Who dies, and why?

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         headline:Blood DNA Methylation Analysis Reveals a Distinctive Epigenetic Signature of Vasospasm in Aneurysmal Subarachnoid Hemorrhage
         description:Vasospasm is a potentially preventable cause of poor prognosis in patients with aneurysmal subarachnoid hemorrhage (aSAH). Epigenetics might provide insight on its molecular mechanisms. We aimed to analyze the association between differential DNA methylation (DNAm) and development of vasospasm. We conducted an epigenome-wide association study in 282 patients with aSAH admitted to our hospital. DNAm was assessed with the EPIC Illumina chip (> 850 K CpG sites) in whole-blood samples collected at hospital admission. We identified differentially methylated positions (DMPs) at the CpG level using Cox regression models adjusted for potential confounders, and then we used the DMP results to find differentially methylated regions (DMRs) and enriched biological pathways. A total of 145 patients (51%) experienced vasospasm. In the DMP analysis, we identified 31 CpGs associated with vasospasm at p-value < 10−5. One of them (cg26189827) was significant at the genome-wide level (p-value < 10−8), being hypermethylated in patients with vasospasm and annotated to SUGCT gene, mainly expressed in arteries. Region analysis revealed 13 DMRs, some of them annotated to interesting genes such as POU5F1, HLA-DPA1, RUFY1, and CYP1A1. Functional enrichment analysis showed the involvement of biological processes related to immunity, inflammatory response, oxidative stress, endothelial nitric oxide, and apoptosis. Our findings show, for the first time, a distinctive epigenetic signature of vasospasm in aSAH, establishing novel links with essential biological pathways, including inflammation, immune responses, and oxidative stress. Although further validation is required, our results provide a foundation for future research into the complex pathophysiology of vasospasm.
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      headline:Blood DNA Methylation Analysis Reveals a Distinctive Epigenetic Signature of Vasospasm in Aneurysmal Subarachnoid Hemorrhage
      description:Vasospasm is a potentially preventable cause of poor prognosis in patients with aneurysmal subarachnoid hemorrhage (aSAH). Epigenetics might provide insight on its molecular mechanisms. We aimed to analyze the association between differential DNA methylation (DNAm) and development of vasospasm. We conducted an epigenome-wide association study in 282 patients with aSAH admitted to our hospital. DNAm was assessed with the EPIC Illumina chip (> 850 K CpG sites) in whole-blood samples collected at hospital admission. We identified differentially methylated positions (DMPs) at the CpG level using Cox regression models adjusted for potential confounders, and then we used the DMP results to find differentially methylated regions (DMRs) and enriched biological pathways. A total of 145 patients (51%) experienced vasospasm. In the DMP analysis, we identified 31 CpGs associated with vasospasm at p-value < 10−5. One of them (cg26189827) was significant at the genome-wide level (p-value < 10−8), being hypermethylated in patients with vasospasm and annotated to SUGCT gene, mainly expressed in arteries. Region analysis revealed 13 DMRs, some of them annotated to interesting genes such as POU5F1, HLA-DPA1, RUFY1, and CYP1A1. Functional enrichment analysis showed the involvement of biological processes related to immunity, inflammatory response, oxidative stress, endothelial nitric oxide, and apoptosis. Our findings show, for the first time, a distinctive epigenetic signature of vasospasm in aSAH, establishing novel links with essential biological pathways, including inflammation, immune responses, and oxidative stress. Although further validation is required, our results provide a foundation for future research into the complex pathophysiology of vasospasm.
      datePublished:2024-04-23T00:00:00Z
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         Epigenetics
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