
DOI . ORG {
}
Title[redir]:
Pooled shRNA Screenings: Experimental Approach | SpringerLink
Description:
RNA interference (RNAi) has emerged as a powerful genetic strategy to functionally interrogate the entire genome by loss-of-function studies. In the last years, several arrayed shRNA libraries that can silence almost all the human genome have been developed. The...
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Keywords {π}
article, pubmed, cas, google, scholar, silva, shrna, cancer, protocol, human, york, usa, privacy, cookies, content, information, publish, pooled, rnai, chapter, cells, columbia, university, research, search, rodriguezbarrueco, marshall, jose, methods, cell, genetics, nature, download, springer, usd, personal, data, log, journal, pancreatic, ruth, netonia, book, genome, genes, screen, access, screening, mammalian, library,
Topics {βοΈ}
large-scale rna-interference-based screens rna-interference-based functional genomics month download article/chapter large-scale rnai screen high-level transgene expression protocol rodriguez-barrueco vitro-pooled shrna screening pooled shrna screenings pooled shrna screen arrayed shrna libraries pooled shrna screening privacy choices/manage cookies device instant download paddison pj editor information editors efficient shrna plasmids pancreatic cancer powerful genetic strategy rna interference experimental approach protocol lentiviral rnai library profiling essential genes european economic area producing recombinant adeno multiplex rnai screening journal finder publish conditions privacy policy mouse genes applied silence gene expression reverse genetics coming improved lentiviral vectors human hematopoietic progenitors somatic cell genetics silva jm accepting optional cookies main content log differentiated blood lineages shrna library human mammary cells human cells identifies protocol usdΒ 49 silva department author correspondence protocol cite social media entire genome cancer cell 2 permissions reprints cancer genetics pooled fashion
Questions {β}
- Paddison PJ, Hannon GJ (2002) RNA interference: the new somatic cell genetics?
Schema {πΊοΈ}
ScholarlyArticle:
headline:Pooled shRNA Screenings: Experimental Approach
pageEnd:370
pageStart:353
image:https://media.springernature.com/w153/springer-static/cover/book/978-1-62703-287-2.jpg
genre:
Springer Protocols
isPartOf:
name:Pancreatic Cancer
isbn:
978-1-62703-287-2
978-1-62703-286-5
type:Book
publisher:
name:Humana Press
logo:
url:https://www.springernature.com/app-sn/public/images/logo-springernature.png
type:ImageObject
type:Organization
author:
name:Ruth Rodriguez-Barrueco
affiliation:
name:Columbia University
address:
name:Institute for Cancer Genetics, Columbia University, New York, USA
type:PostalAddress
type:Organization
name:Columbia University
address:
name:Department of Pathology, Columbia University, New York, USA
type:PostalAddress
type:Organization
type:Person
name:Netonia Marshall
affiliation:
name:Columbia University
address:
name:Institute for Cancer Genetics, Columbia University, New York, USA
type:PostalAddress
type:Organization
name:Columbia University
address:
name:Department of Pathology, Columbia University, New York, USA
type:PostalAddress
type:Organization
type:Person
name:Jose M. Silva
affiliation:
name:Columbia University Medical Center
address:
name:Institute for Cancer Genetics, Columbia University Medical Center, New York, USA
type:PostalAddress
type:Organization
name:Columbia University Medical Center
address:
name:Department of Pathology, Columbia University Medical Center, New York, USA
type:PostalAddress
type:Organization
email:[email protected]
type:Person
keywords:Genome-wide, Pooled screen, shRNA
description:RNA interference (RNAi) has emerged as a powerful genetic strategy to functionally interrogate the entire genome by loss-of-function studies. In the last years, several arrayed shRNA libraries that can silence almost all the human genome have been developed. The generation of new and more efficient shRNA plasmids has allowed performing genetic screens in a pooled fashion and provides the opportunity to investigate the entire genome finding relevant genes to any biological process. In this chapter, the pipeline and methods to perform a pooled shRNA screen are discussed.
datePublished:2013
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name:Columbia University
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type:PostalAddress
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name:Columbia University
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address:
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name:Institute for Cancer Genetics, Columbia University, New York, USA
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name:Institute for Cancer Genetics, Columbia University Medical Center, New York, USA
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