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Title:
Bringing Bioconductor to Galaxy: A CoFest Collaboration – Bioconductor community blog
Description:
Written during CoFest at GBCC2025, this post shares training materials, introduces Galaxy tool wrapping, and previews what’s next for integrating Bioconductor tools in Galaxy.
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Keywords {🔍}
galaxy, bioconductor, cofest, tools, tool, wrapping, gsva, training, wrapper, gbcc, post, whats, community, part, bioinformatics, access, developers, researchers, share, blog, materials, integrating, robert, castelo, bring, package, coming, expand, adding, session, github, interface, experience, methods, analysis, usage, input, draft, work, contributing, bringing, collaboration, written, gretta, charlotte, marcel, ramos, published, page, introduction,
Topics {✒️}
robert castelo r-based packages covering group—maria bioconductor-friendly wrapper templates web-based platform community slide deck support community recognition training slide deck joint meeting brought makes complex analyses high-performance computing robust analytical methods require modest effort demo gave participants functional enrichment analysis charlotte published creative commons cc marcel—worked draft pull request specialised infrastructure required single-cell methods bring bioconductor methods link usage metrics tool means making adding bioconductor tools open-source platforms software development projects bsd 3-clause license bioconductor community blog bring bioconductor tools integrate bioconductor tools provided expert input initial gsva wrapper galaxy home page galaxy runs tools galaxy” github repo galaxy tool xml including gemini cli contributing bringing bioconductor galaxy bioconductor package galaxy tool wrapper integrating bioconductor tools bioconductor package gsva collaboration event held cofest collaboration written session explored gretta gretta training materials
Questions {❓}
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- Why bring Bioconductor tools into Galaxy?
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