ACADEMIC . OUP . COM {}

Analyzed Page
Matching Content Categories
CMS
Monthly Traffic Estimate
How Does Academic.oup.com Make Money
Keywords
Topics
Questions
Schema
Social Networks
External Links
Analytics And Tracking
Libraries
Hosting Providers
CDN Services

We are analyzing https://academic.oup.com/bioinformatics/article/30/11/1493/282534/pages/get-help-with-access.

Title:
Comparing DNA integration site clusters with scan statistics | Bioinformatics | Oxford Academic
Description:
Abstract. Motivation: Gene therapy with retroviral vectors can induce adverse effects when those vectors integrate in sensitive genomic regions. Retroviral
Website Age:
27 years and 4 months (reg. 1998-02-23).

Matching Content Categories {📚}

Education
Science
Technology & Computing

Content Management System {📝}

What CMS is academic.oup.com built with?

Custom-built

No common CMS systems were detected on Academic.oup.com, and no known web development framework was identified.

Traffic Estimate {📈}

What is the average monthly size of academic.oup.com audience?

🌍 Impressive Traffic: 500k - 1M visitors per month

Based on our best estimate, this website will receive around 600,019 visitors per month in the current month.
However, some sources were not loaded, we suggest to reload the page to get complete results.

check SE Ranking
check Ahrefs
check Similarweb
check Ubersuggest
check Semrush

How Does Academic.oup.com Make Money? {💸}

We can't figure out the monetization strategy.

Earning money isn't the goal of every website; some are designed to offer support or promote social causes. People have different reasons for creating websites. This might be one such reason. Academic.oup.com could be secretly minting cash, but we can't detect the process.

Keywords {🔍}

sites, windows, regions, number, vector, clumps, integration, region, window, google, vectors, odds, scholar, false, iss, discoveries, mse, expected, worldcat, genomic, set, critical, jurkat, data, avr, vol, power, discovered, versus, site, gene, clump, cutpoints, methods, therapy, target, crossrefpubmed, bases, width, supplementary, comparison, background, discovery, dna, hiv, genome, infection, chromosome, figure, values,

Topics {✒️}

computational biology oxford academic bioinformatics mathematics books journals oxford university press hacein-bey-abina signature search ccrr google scholar latest university press partners article sign genome-wide insertional mutagenesis scid-x1 gene therapy volume 30 june 2014 term dose-response transcriptomic analysis maryland view design wet-bench follow supplementary data show search genome-wide background odds enhancing variant interpretation genome-wide variation references discussion yield patient-specific clumps single fixed-width scan recursively splits data introduction comprehensive genomic access marketing citing articles clinical gene therapy target false discovery genomic data analysis gene-corrected subjects hiv primary isolate discovered windows results bioinformatics online access accessibility contact false discovery rate human gene therapy successful gene therapy basic data form cited dose-l1000 cd4+ versus jurkat supplementary data author 2014 data collection methods vector reflect preferences avr versus mse challenges clumping methods

Questions {❓}

Looking for your next opportunity?
What values of these parameters should be chosen?

Schema {🗺️}

ScholarlyArticle:
      context:https://schema.org
      id:https://academic.oup.com/bioinformatics/article/30/11/1493/282534
      name:Comparing DNA integration site clusters with scan statistics
      datePublished:2014-01-30
      isPartOf:
         id:https://academic.oup.com/bioinformatics/issue/30/11
         type:PublicationIssue
         issueNumber:11
         datePublished:2014-06-01
         isPartOf:
            id:https://academic.oup.com/bioinformatics/bioinformatics
            type:Periodical
            name:Bioinformatics
            issn:
               1367-4811
      url:https://dx.doi.org/10.1093/bioinformatics/btu035
      inLanguage:en
      copyrightHolder:Oxford University Press
      copyrightYear:2025
      publisher:Oxford University Press
      author:
            name:Berry, Charles C.
            affiliation:Division of Biostatistics and BioInformatics, Department of Family and Preventive Medicine, University of California at San Diego, La Jolla, CA 92093-0901 and Department of Microbiology, Perelman School of Medicine at the University of Pennsylvania, 425 Johnson Pavilion, Philadelphia, PA 19104-6076, USA
            type:Person
            name:Ocwieja, Karen E.
            affiliation:Division of Biostatistics and BioInformatics, Department of Family and Preventive Medicine, University of California at San Diego, La Jolla, CA 92093-0901 and Department of Microbiology, Perelman School of Medicine at the University of Pennsylvania, 425 Johnson Pavilion, Philadelphia, PA 19104-6076, USA
            type:Person
            name:Malani, Nirav
            affiliation:Division of Biostatistics and BioInformatics, Department of Family and Preventive Medicine, University of California at San Diego, La Jolla, CA 92093-0901 and Department of Microbiology, Perelman School of Medicine at the University of Pennsylvania, 425 Johnson Pavilion, Philadelphia, PA 19104-6076, USA
            type:Person
            name:Bushman, Frederic D.
            affiliation:Division of Biostatistics and BioInformatics, Department of Family and Preventive Medicine, University of California at San Diego, La Jolla, CA 92093-0901 and Department of Microbiology, Perelman School of Medicine at the University of Pennsylvania, 425 Johnson Pavilion, Philadelphia, PA 19104-6076, USA
            type:Person
      description:Abstract. Motivation: Gene therapy with retroviral vectors can induce adverse effects when those vectors integrate in sensitive genomic regions. Retroviral
      pageStart:1493
      pageEnd:1500
      siteName:OUP Academic
      thumbnailURL:https://oup.silverchair-cdn.com/oup/backfile/Content_public/Journal/bioinformatics/30/11/10.1093_bioinformatics_btu035/2/m_bioinformatics_30_11_1493_f2.gif?Expires=1813974148&Signature=wDcYfdR0nSihEA2IX0YfhZL~2QHYyVi2rfecY3An8vC6WmbRywVdmC2UITTVWHFAuNy~S6bMn4Wo72uYG4uKnTTj-17hlCeraBGthGbwzbjbd7TzKE20L~cbFqkYXPvET0Voe5ShE5PFTEnc5puOaqgxW-w0ZpnWPeIzjQ389T7krzKrxDDr2UaEitia-wSxyACy865NFjrjnmjRF~AycJb2B2QSdVOC9GslqL1WgwvGE0xA0IJ4WkYfFv125~Y59jokw7MeBdY0M-SIbGegdTxvD9uJaeybmZ3ImgBehpRD~Hp2rbv1iG0HYZUszucaDMXVMoWFc1QmHlb1B~mUgQ__&Key-Pair-Id=APKAIE5G5CRDK6RD3PGA
      headline:Comparing DNA integration site clusters with scan statistics
      image:https://oup.silverchair-cdn.com/oup/backfile/Content_public/Journal/bioinformatics/30/11/10.1093_bioinformatics_btu035/2/m_bioinformatics_30_11_1493_f2.gif?Expires=1813974148&Signature=wDcYfdR0nSihEA2IX0YfhZL~2QHYyVi2rfecY3An8vC6WmbRywVdmC2UITTVWHFAuNy~S6bMn4Wo72uYG4uKnTTj-17hlCeraBGthGbwzbjbd7TzKE20L~cbFqkYXPvET0Voe5ShE5PFTEnc5puOaqgxW-w0ZpnWPeIzjQ389T7krzKrxDDr2UaEitia-wSxyACy865NFjrjnmjRF~AycJb2B2QSdVOC9GslqL1WgwvGE0xA0IJ4WkYfFv125~Y59jokw7MeBdY0M-SIbGegdTxvD9uJaeybmZ3ImgBehpRD~Hp2rbv1iG0HYZUszucaDMXVMoWFc1QmHlb1B~mUgQ__&Key-Pair-Id=APKAIE5G5CRDK6RD3PGA
      image:alt:Clustering of ISs by recovery method. A region of chromosome 17 is shown and marked by locations of HIV vector ISs recovered by each of two methods (see Section 3.3 for details). Sites recovered after cleavage of genomic DNA with Mse are marked with circles; those recovered after cleavage with the Avr cocktail are shown by the triangles. The circles and triangles are shown evenly spaced along the x-axis (lower middle) for ease of visualization, then connected by lines to the chromosome scaffold (bottom) to show their distribution on the chromosome. A clump, or genomic interval enriched for a recovery method, is discovered as follows: Windows containing between 15 and 75 sites were tested for enrichment of Avr or Mse, but only those passing the enrichment test are shown. Each horizontal bar (upper section of figure) represents a window that spans the x-values for a group of sites that show enrichment for Mse. (In this region, no such group shows enrichment for Avr.) The bars are grouped together according to the number of sites spanned and the number of Mse sites required to declare enrichment (see text for details of how the cutpoints were chosen). Those numbers are given just above the right edge of each group as a fraction (required/spanned). The depth, i.e. number of different window size groups over a site, is indicated at the top. Sites with greatest depth are always included in the final clump, but sites at the edges are screened using a likelihood criterion; in this case several sites on each side are excluded. Dashed vertical lines enclose the sites that were ultimately assigned to the clump
PublicationIssue:
      id:https://academic.oup.com/bioinformatics/issue/30/11
      issueNumber:11
      datePublished:2014-06-01
      isPartOf:
         id:https://academic.oup.com/bioinformatics/bioinformatics
         type:Periodical
         name:Bioinformatics
         issn:
            1367-4811
Periodical:
      id:https://academic.oup.com/bioinformatics/bioinformatics
      name:Bioinformatics
      issn:
         1367-4811
Person:
      name:Berry, Charles C.
      affiliation:Division of Biostatistics and BioInformatics, Department of Family and Preventive Medicine, University of California at San Diego, La Jolla, CA 92093-0901 and Department of Microbiology, Perelman School of Medicine at the University of Pennsylvania, 425 Johnson Pavilion, Philadelphia, PA 19104-6076, USA
      name:Ocwieja, Karen E.
      affiliation:Division of Biostatistics and BioInformatics, Department of Family and Preventive Medicine, University of California at San Diego, La Jolla, CA 92093-0901 and Department of Microbiology, Perelman School of Medicine at the University of Pennsylvania, 425 Johnson Pavilion, Philadelphia, PA 19104-6076, USA
      name:Malani, Nirav
      affiliation:Division of Biostatistics and BioInformatics, Department of Family and Preventive Medicine, University of California at San Diego, La Jolla, CA 92093-0901 and Department of Microbiology, Perelman School of Medicine at the University of Pennsylvania, 425 Johnson Pavilion, Philadelphia, PA 19104-6076, USA
      name:Bushman, Frederic D.
      affiliation:Division of Biostatistics and BioInformatics, Department of Family and Preventive Medicine, University of California at San Diego, La Jolla, CA 92093-0901 and Department of Microbiology, Perelman School of Medicine at the University of Pennsylvania, 425 Johnson Pavilion, Philadelphia, PA 19104-6076, USA

Social Networks {👍}(2)

External Links {🔗}(144)

Analytics and Tracking {📊}

Google Analytics
Google Analytics 4
Google Tag Manager

Libraries {📚}

AOS
Foundation
jQuery
Sharethis
WOW

Emails and Hosting {✉️}

Mail Servers:

Name Servers:

ns-1219.awsdns-24.org
ns-1635.awsdns-12.co.uk
ns-223.awsdns-27.com
ns-780.awsdns-33.net

CDN Services {📦}

Com/data/Multimedia/journals-careers-network
Com/data/Multimedia/oup-logo
Com/data/SiteBuilderAssets/Live/CSS/bioinformatics/v-638567332179418482/Site
Com/data/SiteBuilderAssets/Live/Images/bioinformatics/bioinformatics_f1-205396838
Com/data/SiteBuilderAssets/Live/Images/bioinformatics/bioinformatics_h11820233911
Com/data/SiteBuilderAssets/Live/Images/bioinformatics/bioinformatics_title-205396838
Com/data/SiteBuilderAssetsOriginals/Live/CSS/journals/v-638868949748413027/global
Com/oup/backfile/Content_public/Journal/bioinformatics/30/11/10
Com/oup/backfile/Content_public/Journal/bioinformatics/Issue/30/11/2/m_cover
Com/oup/scm
Com/Themes/Client/app/css/v-638863295070596493/site
Com/Themes/Client/app/jsdist/v-638863295105528688/article-page
Com/Themes/Client/app/jsdist/v-638863295183952514/site
Com/Themes/Silver/app/js/jquery
Com/Themes/Silver/app/vendor/v-638848469881276066/jquery-migrate-1
Com/UI/app/fonts/icons
Com/UI/app/img/v-638848468761611783/apple-touch-icon
Com/UI/app/img/v-638848468761611783/browserconfig
Com/UI/app/img/v-638848468761711775/favicon-16x16
Com/UI/app/img/v-638848468761761238/favicon-32x32
Com/UI/app/img/v-638848468761861270/favicon
Com/UI/app/img/v-638848468762061922/manifest
Com/UI/app/img/v-638848468762311921/safari-pinned-tab
Com/UI/app/svg/account
Com/UI/app/svg/chevron-right-white
Com/UI/app/svg/i
Com/UI/app/svg/pdf
Com/UI/app/svg/umbrella/oup-logo
Com/UI/app/svg/umbrella/oxford-academic-logo
Jsdelivr
Pbgrd
Privado

5.48s.