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Data structures and algorithms for analysis of genetics of gene expression with Bioconductor: GGtools 3.x | Bioinformatics | Oxford Academic
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Abstract. Summary: Associations between DNA polymorphisms and mRNA abundance are a natural target of genetic investigations, and microarrays facilitate gen
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expression, gene, results, oxford, data, package, association, scholar, snp, google, university, associations, vol, worldcat, journals, bioinformatics, genes, set, press, article, author, analysis, class, crossrefpubmed, search, issue, ggtools, permissions, genotypes, assay, open, genomics, array, genome, linear, human, books, articles, filter, academic, notes, journal, structures, bioconductor, view, mrna, abundance, genetic, genomewide, genotyping,
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name:Data structures and algorithms for analysis of genetics of gene expression with Bioconductor: GGtools 3.x
datePublished:2009-04-05
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url:https://dx.doi.org/10.1093/bioinformatics/btp169
inLanguage:en
copyrightHolder:Oxford University Press
copyrightYear:2025
publisher:Oxford University Press
author:
name:Carey, Vincent J.
affiliation:Channing Laboratory, Department of Medicine, I2B2 National Center for Biocomputing, Brigham and Women's Hospital, 75 Francis St. Boston MA 02115 and Fred Hutchinson Cancer Research Center, 1100 Fairview Ave. N, Seattle, WA 98109, USA.
type:Person
name:Davis, Adam R.
affiliation:Channing Laboratory, Department of Medicine, I2B2 National Center for Biocomputing, Brigham and Women's Hospital, 75 Francis St. Boston MA 02115 and Fred Hutchinson Cancer Research Center, 1100 Fairview Ave. N, Seattle, WA 98109, USA.
type:Person
name:Lawrence, Michael F.
affiliation:Channing Laboratory, Department of Medicine, I2B2 National Center for Biocomputing, Brigham and Women's Hospital, 75 Francis St. Boston MA 02115 and Fred Hutchinson Cancer Research Center, 1100 Fairview Ave. N, Seattle, WA 98109, USA.
type:Person
name:Gentleman, Robert
affiliation:Channing Laboratory, Department of Medicine, I2B2 National Center for Biocomputing, Brigham and Women's Hospital, 75 Francis St. Boston MA 02115 and Fred Hutchinson Cancer Research Center, 1100 Fairview Ave. N, Seattle, WA 98109, USA.
type:Person
name:Raby, Benjamin A.
affiliation:Channing Laboratory, Department of Medicine, I2B2 National Center for Biocomputing, Brigham and Women's Hospital, 75 Francis St. Boston MA 02115 and Fred Hutchinson Cancer Research Center, 1100 Fairview Ave. N, Seattle, WA 98109, USA.
type:Person
description:Abstract. Summary: Associations between DNA polymorphisms and mRNA abundance are a natural target of genetic investigations, and microarrays facilitate gen
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siteName:OUP Academic
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headline:Data structures and algorithms for analysis of genetics of gene expression with Bioconductor: GGtools 3.x
image:https://oup.silverchair-cdn.com/oup/backfile/Content_public/Journal/bioinformatics/25/11/10.1093_bioinformatics_btp169/2/m_bioinformatics_25_11_1447_f1.jpeg?Expires=1814134330&Signature=v-rBZ5lBRRqhj7t8Q2vf428W1KxVPjIy0g9tkOnf4sQzHxJPnaZRIj13~RQokx5tWfch1Rru3gHWeSnMXcmaSDFXTtEsOX926te949NVftu9n-y4~-KWLqKtNuYnflk1o1V2gxxrJ9l1k3K5empEiDcdXtQ3NjpiaN96pyYarE3YmmlQtFXWAIGZ0-j5x4OINpBSl2lA68eMwZAKSMQKVZg9ZUKlEQbmT~huz~PSnQoq4Rv4k8hfLdoC8vEEmb9eybpi7Y7qPXmFLFTdvEWEEJUg5dnAMjW~rMZ-Tf-0DgjD7ffyJIduxf5eoWG9DCPgDGSS4YS0dDFTU7Gn-5gyWQ__&Key-Pair-Id=APKAIE5G5CRDK6RD3PGA
image:alt:HLA class 2 gene set eQTL candidates. The gray line is the line of identity (gene location = SNP location), where cis associations would be found. Glyphs are plotted where association test P < 10β5.
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Person:
name:Carey, Vincent J.
affiliation:Channing Laboratory, Department of Medicine, I2B2 National Center for Biocomputing, Brigham and Women's Hospital, 75 Francis St. Boston MA 02115 and Fred Hutchinson Cancer Research Center, 1100 Fairview Ave. N, Seattle, WA 98109, USA.
name:Davis, Adam R.
affiliation:Channing Laboratory, Department of Medicine, I2B2 National Center for Biocomputing, Brigham and Women's Hospital, 75 Francis St. Boston MA 02115 and Fred Hutchinson Cancer Research Center, 1100 Fairview Ave. N, Seattle, WA 98109, USA.
name:Lawrence, Michael F.
affiliation:Channing Laboratory, Department of Medicine, I2B2 National Center for Biocomputing, Brigham and Women's Hospital, 75 Francis St. Boston MA 02115 and Fred Hutchinson Cancer Research Center, 1100 Fairview Ave. N, Seattle, WA 98109, USA.
name:Gentleman, Robert
affiliation:Channing Laboratory, Department of Medicine, I2B2 National Center for Biocomputing, Brigham and Women's Hospital, 75 Francis St. Boston MA 02115 and Fred Hutchinson Cancer Research Center, 1100 Fairview Ave. N, Seattle, WA 98109, USA.
name:Raby, Benjamin A.
affiliation:Channing Laboratory, Department of Medicine, I2B2 National Center for Biocomputing, Brigham and Women's Hospital, 75 Francis St. Boston MA 02115 and Fred Hutchinson Cancer Research Center, 1100 Fairview Ave. N, Seattle, WA 98109, USA.
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