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Title[redir]:
WebGestalt 2019: gene set analysis toolkit with revamped UIs and APIs - PMC
Description:
WebGestalt is a popular tool for the interpretation of gene lists derived from large scale -omics studies. In the 2019 update, WebGestalt supports 12 organisms, 342 gene identifiers and 155 175 functional categories, as well as user-uploaded ...
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Keywords {π}
gene, webgestalt, data, enrichment, analysis, results, functional, pmc, set, categories, figure, google, doi, scholar, article, sets, genes, pubmed, database, databases, webgestaltr, users, enriched, gsea, free, table, information, web, server, number, ora, update, redundancy, input, significant, nucleic, acids, package, section, dag, res, zhang, visualizations, pathway, phosphosites, reduction, supplementary, list, nlm, wikipathways,
Topics {βοΈ}
high-quality static images generating high-quality figures force field-based algorithm high-resolution png formats network topology-based analysis pmc beta search phosphosite-specific signature analysis [google scholar] studied post-translation modifications overlapping/leading edge genes description /api/summary/[type] sequence-based prediction gmt files /api/reference data availability statements user-uploaded functional databases tyrosine kinase networks set advanced parameters weighted set cover similar web servers plain text dependent programmatic access endpoints publisher site pdf leading edge genes site-level analysis nucleic acids res r-based tools gene set enrichmentanalysis supplementary materials included gene lists derived uploading gene lists mcnair medical institute knowledge-based approach mammalian protein complexesβ2019 oncogene-specific activation org/gsea/msigdb/index fewer gene sets selected gene sets exploring gene sets venn diagram shows handling user submissions phosphosite enrichment analysis site id annotation united states government upstream data sources 15-mer sequence motif directed acyclic graph false discovery rate venn diagram illustrates janice mcnair foundation prostate cancer progression
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