
NCBI . NLM . NIH . GOV {
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Title[redir]:
RNA-Seq Signatures Normalized by mRNA Abundance Allow Absolute Deconvolution of Human Immune Cell Types - PMC
Description:
The molecular characterization of immune subsets is important for designing effective strategies to understand and treat diseases. We characterized 29 immune cell types within the peripheral blood mononuclear cell (PBMC) fraction of healthy donors ...
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Keywords {๐}
cell, doi, types, expression, cells, deconvolution, immune, data, genes, values, rnaseq, mrna, google, scholar, pubmed, gene, methods, samples, microarray, cohort, type, table, figure, pmc, article, free, tpm, abundance, signature, pbmc, rna, normalization, analysis, figures, cytometry, proportions, absolute, pbmcs, matrix, results, blood, modules, panel, flow, obtained, performed, method, star, memory, scaling,
Topics {โ๏ธ}
org/web/packages/rtsne/index org/web/packages/dynamictreecut/index org/web/packages/ape/index org/web/packages/wgcna/index io/kallisto/download tximport v1 single-cell rna-seq reveals 20ย ฮผm template-switching oligos [google scholar] atkuri [google scholar] willinger [google scholar] bindea house clinical trialย nct pbmc-derived rna-seq data supplemental information mmc8 pmc beta search single-cell rna-seq study ground-truth cell proportions fluorescence-activated cell sorting single-cell rna-seq full-length rna-seq magnetic-activated cell sorting retrieval real ฯ proportions rna-seq transcriptomic profiling ground-truth proportions needed cell type-specific genes immune-specific hk genes rna-seq pbmc data rna-seq expression values rna-seq data analysis statistical analysis rna-seq external rna-seq data license information pmcid pbmc-derived transcriptomics data ฮฒ coefficient corresponds united states government ziegler-heitbrock references abbas rna-seq pbmc samples flow cytometry-based immunophenotyping cell type average immune-specific genes identified ฯ ห normalize rna-seq data improve absolute estimation ฮฒ coefficients account cell-mixture deconvolution ฮฑ ห normalizing rna-seq data smartseq v2 protocol figures s1โs9 mmc1
Questions {โ}
- Gene expression of peripheral blood mononuclear cells as a tool in dietary intervention studies: what do we know so far?
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